Gene Francci3_3996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3996 
Symbol 
ID3906957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4780959 
End bp4781756 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content66% 
IMG OID637881325 
Producthypothetical protein 
Protein accessionYP_483075 
Protein GI86742675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.570232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAGGC CCGCCGTGGA AGAGACTCCC TGGAAGCAGG TGAACATCAC CTACCCCGCC 
GAGGACCCCG CTGAGCGGGA GCGTCAAGCC ATCGCCCACC TGACCGAAAT CCTCCCGCCG
GCCGAGGCAG GCGGCCTGAT CACCTCCTGG TGGTTCATCC GCAAAGGCCC GTGGCGTATC
CGCTACCTTC TCACTGACAC CGCGGGCGGC CGTCACAGCG ACGCCACCGA CCCGCTCCAT
CCCCTGCTCA CGAAAGGCGT CATCTGGACC GACGACATCT ACGAACCTGA GGTCCACGCC
TTCGGCGGGC CGGCCAGCAT GGACCTGGCC CACTCGCTGT TCCACGCGGA CAGCCGCCGT
CTGCTCTCCG CCCTTGGCGA CGGCTGCACC GACCGGCGGG AACGCTCCCT CCTGCTGTGT
ACCAAGCTCA TGCGGGCCGC GGGACTGGAC ATCAACGAGC AAGGCGACGT ATGGGCACGC
GTAGCTGAGC AGCGCGCCGC CCTCGCCGGA GTACCACCCG ACCCGCAGAT ATGGGCGTCC
TTCACCTGGG ACGTACGTCG TCTCCTCCTC GGCGACGCCC GCGCAGACCT CACCGACGGC
GACTGGCTCA CAGCGTTCCA CGAGACAGGA CGAGCGCTCC GAACCCTGCG AGAAAACGGC
CAACTCACCC GGGGAATACG CTCGACAATC GCACTACATG TAATCTTCCA CTGGAACCGA
ATCGGACTCG CAGCAACCAC CCAGGCCACG CTCGCGCGTG CCGCGAAGGA AGCCGTCTTC
GACAATGCAC CCGGATAA
 
Protein sequence
MERPAVEETP WKQVNITYPA EDPAERERQA IAHLTEILPP AEAGGLITSW WFIRKGPWRI 
RYLLTDTAGG RHSDATDPLH PLLTKGVIWT DDIYEPEVHA FGGPASMDLA HSLFHADSRR
LLSALGDGCT DRRERSLLLC TKLMRAAGLD INEQGDVWAR VAEQRAALAG VPPDPQIWAS
FTWDVRRLLL GDARADLTDG DWLTAFHETG RALRTLRENG QLTRGIRSTI ALHVIFHWNR
IGLAATTQAT LARAAKEAVF DNAPG