| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3979 |
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| Symbol | |
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| ID | 3906939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4761087 |
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| End bp | 4762670 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637881307 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_483058 |
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| Protein GI | 86742658 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGGCAG ATTCGGACGA GGGTGGTTCG GGTGAGGGTG GTGCCGTGGT CGGCAGGACC
GCCGGTACCG GGGCGGGCGC CTCGCCGGAA GGTGGCGCAC CGCCGGGCCG GCGGATTCCG
GGCTGGGCCG TGCTGGCCGT CTGCTGCCTG GCCCAGTTCA TGGTCGTTCT GGACATTTCG
ATCGTGAACG TCGCGCTGCC GTCGATGCAG ACCGATCTCG GGATGACGGC GAGCGGCCTG
CAGTGGGTGG TCAACGCCTA TACGATCGCG TTCGCGGGTC TGCTGCTCTT CGGCGGCCGG
GCGGCGGATC TGTTCGGTCG CCGCCGGGTG TTCGTGGCCG GGCTGGCGCT GTTCACCCTG
GCGAGCCTCG GCGGTGGTTT TGCGCGGACC GAGGCGCAGC TCATCGTCGC CCGGGCCGTG
CAGGGGCTGG GCGGGGCCGT GCTCGCCCCG GCGACGCTGA CCCTGTTGAT GACCTCCTTC
GCCGAGGGGC GGGAGCGGAC CCGGGCGTTG GGCGCGTGGG GCGCCACCGC GGCCAGCGGC
GGGGCGCTTG GCGCGATCGT CGGCGGTGCG CTGACCGAGG TCGCGAACTG GCGGTGGGTG
CTGTTCGTCA ACGTGCCGAT CGGCGTGGCG CTCCTCGTGG CCGCCCGGCT CGTGCTCGTC
GAGTCGCGGG GCCAACTGAG CCGGCTGCGT GATCTCGACA TTCCCGGCAC GGTGACCGTT
ACCGGGGGTC TGGTGCTGTC GGTCTACGTC ATCGTCCGCA CCGAGAGTTC CTCCTGGACG
TCCCCGGTCA CACTCGGGAT GCTGGCCGGG GCGGTAGTGC TTCTTGCCGC GTTCGTGGCC
GTCGAGGTCA CGACCCCCGC CCCGCTGGTG CCGCTGAGCG TCTTCCGCTA CCCCGGGCTC
GCCGCGGCGA ACTCGGTCGC AGCCTTCCTC GGCGCCGCTA TGTTCACGAT CTTCTTTTTC
CTTACCCTCT TCCTCCAGCA GGTTCAGGGT TACAGCCCGC TGCGCGCCGG GGTGGCCATG
CTCCCGATGC CGCTCATGAT CATCGTTGCC TCGCGGATTG TCACCCGGAT GATCGGGCGG
CTCGGTCCGC GGCCGATCAT CGTGTTCGGT CTCGTGAGCG GAACGGCGGG TCTGCTCTGG
ATGTCGACGA TCACCCGGGA CGGCTCGTAC TGGGTGCACG TGTTCGGCCC GGTCCTGATC
GTCGGGCTGG GGGTGGGGTC TATCATGGTC GCGATGGTCG CTGCGGCCAC GGCGGGCGTG
CCGATGCGCC TGGCGGGCCT CGCGTCGGGT CTGATCAACA CCAGCCGCCA GATCGGCGCG
GCGATCGGCC TCGCCGCGGT GTCGACGATC GCGACCAGGC ATACCGACGG CCGCCTCAGG
CACGGGGCCG CGCGGCTTGA CGCGCTGGCC TCCGGCTACT CCCTCGGGCT GTTCATCGGC
GGCTGCGTCC TCGCGGTCGG GATCCTGGCC GCGCTGCTGC TGCCCCGTGT CCGGCGGCCC
GAGCCGGAGC CGCCCCTCGG CGCGACGGAG AAGACCGCGT CCGGGGCCTC GGATGACGAG
GACCAGGCAC TCGCGGAGAT CTGA
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| Protein sequence | MRADSDEGGS GEGGAVVGRT AGTGAGASPE GGAPPGRRIP GWAVLAVCCL AQFMVVLDIS
IVNVALPSMQ TDLGMTASGL QWVVNAYTIA FAGLLLFGGR AADLFGRRRV FVAGLALFTL
ASLGGGFART EAQLIVARAV QGLGGAVLAP ATLTLLMTSF AEGRERTRAL GAWGATAASG
GALGAIVGGA LTEVANWRWV LFVNVPIGVA LLVAARLVLV ESRGQLSRLR DLDIPGTVTV
TGGLVLSVYV IVRTESSSWT SPVTLGMLAG AVVLLAAFVA VEVTTPAPLV PLSVFRYPGL
AAANSVAAFL GAAMFTIFFF LTLFLQQVQG YSPLRAGVAM LPMPLMIIVA SRIVTRMIGR
LGPRPIIVFG LVSGTAGLLW MSTITRDGSY WVHVFGPVLI VGLGVGSIMV AMVAAATAGV
PMRLAGLASG LINTSRQIGA AIGLAAVSTI ATRHTDGRLR HGAARLDALA SGYSLGLFIG
GCVLAVGILA ALLLPRVRRP EPEPPLGATE KTASGASDDE DQALAEI
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