| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3921 |
|---|
| Symbol | |
|---|
| ID | 3906880 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4689354 |
|---|
| End bp | 4689986 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637881248 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_483000 |
|---|
| Protein GI | 86742600 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1507] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0720099 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTATGG CACCGGCGGT GACGGCCGAG GATCTCGAGA TCGTGCGCCG TCAGCTCTCC
CGCGAGCCGC GAGCCGTCCT CGCGGTGGCC CATCGCTGCT CGTGCGGTCT TCCCGACGTG
GTCGAGACCG CACCGCGGCT TGCCGGCGGC ACCCCCTTCC CGACCCTGTA CTACCTCACC
TGCCCCCGGG CTGCGTCGGC GATCTCGCGG CTGGAGGGGG TCGGGGTGAT GCGCGAGATG
ACAGCCCGGC TGGCGGAGGA TCCGCGGCTC GCCGCCGCCT ACGCCGTCGC CCACCGGGAC
TACCTCGCCC GGCGCGACGC GCACGAGGTG CTGCCCGCCG CTCCGAGCGC GGGTGGCATG
CCCGATCGGG TCAAGTGCCT GCACGTCCTC GTAGCGCACA GTCTCGCCGT GGGTCCGGGA
GTCAATCCGT TCGGTGACGA GGCCCTTGCG GCTGTTCCCG ACTGGGGTCG GCGGGGGCCG
TGCGTGGCCG GTGGCCGATG TCCGGGCGTT GACGAGGCCG AGGCGCCCGG ACCCGCCCCG
GGCGGCGGGG CGGCGGGCGA CGGACCGACC GGCAGTCGTT CGACAGGGGA TCCGGCAGGG
GACCCGACGG GGGATCCGAA AGAGATCCGA TAG
|
|---|
| Protein sequence | MSMAPAVTAE DLEIVRRQLS REPRAVLAVA HRCSCGLPDV VETAPRLAGG TPFPTLYYLT
CPRAASAISR LEGVGVMREM TARLAEDPRL AAAYAVAHRD YLARRDAHEV LPAAPSAGGM
PDRVKCLHVL VAHSLAVGPG VNPFGDEALA AVPDWGRRGP CVAGGRCPGV DEAEAPGPAP
GGGAAGDGPT GSRSTGDPAG DPTGDPKEIR
|
|---|
| |