| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3865 |
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| Symbol | |
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| ID | 3906633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4627929 |
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| End bp | 4629791 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637881191 |
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| Product | GTP-binding protein TypA |
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| Protein accession | YP_482944 |
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| Protein GI | 86742544 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCC CGGAGCGCAT CACCGTGTCT CTTCGTGCCG ATCTTCGAAA CGTGGCAATC
ATCGCCCACG TCGACCACGG CAAGACCACC CTCGTCGACG CCATGCTGCG CCAGTCCGGC
GCGTTCGGCG AGCATGCCGA GCTCACCGAC CGCGTGATGG ACTCGATGGA CCTGGAGCGT
GAGAAGGGCA TCACGATCCT CGCGAAGAAC ACCGCGGTCC GTTACGGCGA CATCACGATC
AACATCGTTG ACACGCCCGG TCACGCCGAC TTCGGCGGTG AGGTCGAGCG TGGCCTGTCG
ATGGTCGACG GCGTCCTGCT GCTCGTGGAC GCGAGCGAGG GCCCGCTGCC CCAGACGCGC
TTCGTCCTGC GCAAGGCGCT CGCGGCGCGG CTGCCGGTGG TGCTCGTCAT CAACAAGGTG
GACCGGTCGG ACGCCCGGAT CGCCGAGGTG GTTGACGAGA CCTACGAGCT CTTCCTCGAC
CTCGACGCCG ACGAGGACCA GATCGACTTC CCGATCGTCT ACTGCAACGC GAAGGCGGGT
CGTGCCTCCA CCACCCGCCC GGCCGACGGG GTGAGCCCGG ACTCACCCGA TCTCAAGCCG
CTGTTCGACC TTCTGCTGGA GACCGTGCCG GCGCCGTCGT TTGATCCTGA CTCGCCGCTG
CAAGCCCTGG TCACCAACCT CGACGCGTCC CCGTACCTCG GCCGGCTCGC GCTGTGCCGG
GTGCACAACG GCACGATCAA GCGTGGTCAG CCGGCGACGC TGTGCCGGGC CGACGGCAGC
CAGCAGCGCG TCAAGATCAG CGAGATGCTG ATGACGCAGG CGCTCGAGCG GGTACCGGCG
GAGTCGGCCG GGCCGGGCGA CATCATCGCC ATCGCCGGCA TCCCCGACAT CACGATCGGG
GAGACCCTCG CCGACGCCGA TGATCCCCGG CCGCTGCCGG TTATCACCGT TGACGAACCG
TCCATCAGCA TGACGATCGG CATCAACACC TCCCCGCTCG CCGGCCGTTC CGGCAAGAAG
CTGACGGCGC GGCTGGTCAA GAACCGGCTG GACGCCGAGC TCGTCGGCAA CGTGTCGATC
CGGGTCCTGC CCACCGAGCG GCCGGACACC TGGGAGGTGC AGGGCCGCGG GGAGCTGCAG
CTCGCCGTGC TTGTCGAGCT GATGCGGCGC GAGGACTTCG AGCTGACCGT CGGCAAGCCG
CAGGTCGTCA CCCGCACTGT CGACGGTAAG ATCCACGAGC CGGTGGAGCG CCTCACCATC
GACGCGCCCG AGGAGTTCCT CGGCACGCTG ACCCAGCTGC TCGCGCTGCG CAAGGGCCGG
GTCGAGCAGA TGGTCAACCA CGGCACCGGC TGGATCCGGC TGGAGTACCT GGTCCCGGCC
CGCGGGCTGA TCGGGTTCCG GACCGAGTTC CTCACCGAGA CCCGCGGTAC CGGGCTGCTG
CACCACGTCT TCGACCGGTA CGAGCCCTGG TTCGGGGAGC TGCGCACCCG GGCGACAGGC
TCCATGGTCG CCGACCGCAG CGGGGTGGCG ACCGCATACG CCCTGTTCAA CCTCCAGGAA
CGCGGCACGA TGTTCGTCGG GCCGACGACC GAGGTCTACG AGGGCATGAT CGTGGGTGAG
AACTCCCGGG CGGACGACAT GGACGTCAAC CCGACCAAGG AAAAGAAGCT CACCAACATG
CGTTCATCCA CCGGCGACGA GCTGGTCCGG CTCACCCCGC ACCGGATACT CACCCTTGAG
CAGGCGCTGG AGTTCTGCCG CGAGGACGAG TGCGTGGAGG TCACCCCGGG CTTCGTGCGT
CTGCGCAAGG TGGCGCTGAC CGCCGCCGAG CGCGAGAAGA TCCGCTCCCG CCGCCGAGCC
TGA
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| Protein sequence | MSAPERITVS LRADLRNVAI IAHVDHGKTT LVDAMLRQSG AFGEHAELTD RVMDSMDLER
EKGITILAKN TAVRYGDITI NIVDTPGHAD FGGEVERGLS MVDGVLLLVD ASEGPLPQTR
FVLRKALAAR LPVVLVINKV DRSDARIAEV VDETYELFLD LDADEDQIDF PIVYCNAKAG
RASTTRPADG VSPDSPDLKP LFDLLLETVP APSFDPDSPL QALVTNLDAS PYLGRLALCR
VHNGTIKRGQ PATLCRADGS QQRVKISEML MTQALERVPA ESAGPGDIIA IAGIPDITIG
ETLADADDPR PLPVITVDEP SISMTIGINT SPLAGRSGKK LTARLVKNRL DAELVGNVSI
RVLPTERPDT WEVQGRGELQ LAVLVELMRR EDFELTVGKP QVVTRTVDGK IHEPVERLTI
DAPEEFLGTL TQLLALRKGR VEQMVNHGTG WIRLEYLVPA RGLIGFRTEF LTETRGTGLL
HHVFDRYEPW FGELRTRATG SMVADRSGVA TAYALFNLQE RGTMFVGPTT EVYEGMIVGE
NSRADDMDVN PTKEKKLTNM RSSTGDELVR LTPHRILTLE QALEFCREDE CVEVTPGFVR
LRKVALTAAE REKIRSRRRA
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