Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3840 |
Symbol | |
ID | 3905588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4601001 |
End bp | 4601606 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637881166 |
Product | hypothetical protein |
Protein accession | YP_482919 |
Protein GI | 86742519 |
COG category | [R] General function prediction only |
COG ID | [COG1611] Predicted Rossmann fold nucleotide-binding protein |
TIGRFAM ID | [TIGR00725] conserved hypothetical protein, DprA/Smf-related, family 1 [TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.054425 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGTCT GCGTGTACTG CGCGTCCTCC GAGCTGATCG ACCCCTCGTA CGTCCTGCTG GCGGCCCAGA CCGGCACCGA GCTCGCCCGG CGCGGCCACA CCCTGGTTTC CGGCGGAGGC TCGGTGTCGT GCATGGGGGC GATCGCCCGG GCGGTGCGGG CCAGCGGAGG TTACACGGTC GGCGTGATCC CGCGGGCGCT GGTCGCGATG GAGGTCAGCG ACCTGGACGC GGACGAGATC ATCGTCACGG AGACCATGCG GGAGCGTAAG GCGCTCATGG ACGCGCGCTC GGATGCCTTC CTGGCGCTGC CCGGGGGCCT GGGCACCCTC GAGGAGCTGC TCGAGGTCTG GGTCGCCGGG GTCCTGCGCA TGCACACCAA GCCCGTGGTG CTCCTCGACC CCGACGGGGT CTTCGCCCAC CTGCGGATCC TCGTCGACGA GATGGTCGAC CGCGGGTTCG TCCGCCCGCG CGCCCGGGAC ACCCTCCGCT GGGCGACCGG CATCGGCGAG GCGGTGGACT TCCTGGAGGC GGGCGTGACA GCGGCGACCG TCACCTCCCC TCCGCCCCCG ACCCCGACCC CGCGGGAGAT CGTCGAAGGC GACTGA
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Protein sequence | MNVCVYCASS ELIDPSYVLL AAQTGTELAR RGHTLVSGGG SVSCMGAIAR AVRASGGYTV GVIPRALVAM EVSDLDADEI IVTETMRERK ALMDARSDAF LALPGGLGTL EELLEVWVAG VLRMHTKPVV LLDPDGVFAH LRILVDEMVD RGFVRPRARD TLRWATGIGE AVDFLEAGVT AATVTSPPPP TPTPREIVEG D
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