| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3814 |
|---|
| Symbol | |
|---|
| ID | 3905562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 4572418 |
|---|
| End bp | 4573272 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637881140 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_482893 |
|---|
| Protein GI | 86742493 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2887] RecB family exonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.18541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.492417 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGATG GCGCAACTGG AGCTCACCGG CCTGCCCCGC CGGCTTTTTT CCTGCACGCC
GTCGCGGCTG GCGGCCTTCG AGGACTGCCC CCGCCGGTAC CGGATGACGT ATCTGGACCG
GCCGCGGCCG CCCAAGGGGC CGCCCTGGGC GCACACCTCC TTCGGCGTCA GCGTGCACAA
CGCGCTGCGA CGCTGGTGGG AGGGGGGCCG ATCGAGCAAC GGGTCCCACA GCGGGCCGCG
GCGCTGTTGC GGTTGCTGTG GGTCGACGAG GGTTTCCGGG ACGGTGAGCA GTCGTACCGG
TGGCGCGAGC GCGGCGCGCG GATGGCGCAT GACTATGTCG CGCACCTCGA TCCGGCGGCC
GAGCCGCGCG GGGTCGAGCG TTCGGTCGCG GCCCGTACCG AGGCGCTGGC CTTCTCCGGA
CGGGTGGACC GTCTCGACGA CCGGGACGGG GAGCTGGTCG TCGTCGACTA CAAGACCGGA
CGCCGGCCGG TCACCGACGA CGATGCGCGA TCGTCCCCGG CGCTCGCGCT CTACGCCCTG
GCCGCCGGGC GGATGCTGCG CCAACCATGC CGGCGGGTCG AGCTGCACCA CGTGCCCAGT
GGGCGGGTCG CGGCCGCCGA GCACACCGAG GCGAGCATCG CCCGGCACGT GCGGCGGGCG
GAGTCGGTCG CGGCGGACGC CGTGCGCGCG ACGGAGGCCC TGCGGGCGGG TGAGGATCCG
CAACGGGCGT TTCCGCCGAG CCCCGGCCCC CTGTGCTCGT GGTGCGATTT CCGCAGCCAC
TGCCCCGAGG GGCAGGCGGC CGGCCCCGAA CGCCAGCCCT GGGACGCCCT CGGCGACGAG
GGCGACGAGG ACTGA
|
|---|
| Protein sequence | MSDGATGAHR PAPPAFFLHA VAAGGLRGLP PPVPDDVSGP AAAAQGAALG AHLLRRQRAQ
RAATLVGGGP IEQRVPQRAA ALLRLLWVDE GFRDGEQSYR WRERGARMAH DYVAHLDPAA
EPRGVERSVA ARTEALAFSG RVDRLDDRDG ELVVVDYKTG RRPVTDDDAR SSPALALYAL
AAGRMLRQPC RRVELHHVPS GRVAAAEHTE ASIARHVRRA ESVAADAVRA TEALRAGEDP
QRAFPPSPGP LCSWCDFRSH CPEGQAAGPE RQPWDALGDE GDED
|
|---|
| |