Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3798 |
Symbol | |
ID | 3905546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4551769 |
End bp | 4552560 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 637881124 |
Product | endonuclease/exonuclease/phosphatase |
Protein accession | YP_482877 |
Protein GI | 86742477 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00159012 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGGCTGG GCTCCTTCAA CATCATGCAC GGCCTGTCGC TCACGGATGG GACGGTCGAG CCCGCCCGCT TCGCCGCGGC CGTCTCCGCT CTCGGCGTGG ACGTCCTCGG GCTCCAGGAG GTCGATCTCG ACCAGCCACG ATCGGGTGGG CTGGACCTCG CCGCGGAGGC GGCGGCGATG ATCGGAGCCG GCGACGACGA CTGGCGGTTC GTCCCCACCG TCTTCGGCAC GCCCGGCGTG GGCTGGCGGC CGGCTGACGG GCAGCGCCGG GACGACGAGC CGGCGTACGG CATCGCTCTG ATCAGCCGGC TGCCCGTCCG TGAGTGGCGA GTGATCGACC TCGGCCGGGC GCCGGTGCGG TCCCCGATCG CGATACCGGG GGGTCCGGAC AGGCGGGGAC GTCTGATCAT GCTCGACGAC GAGCCGCGGG CCGCGATCGC CGCGCGGGTG GAGTCGGCCG GGGGCCCGCT GACGGTGGTC AACACCCATC TGTCGTTCGT GCCGGGGTGG AACGCCGTGC AGCTGCGCCG GCTGGCCCGC CGGCTCGCGG ACGTCCCGGG GCCGCTGGTC CTGCTGGGCG ATCTGAACCT GCCCGGCCGG CTACCGGCCG CGCTCACCCG CTGGCGCCGG TTGGCGGTGA CGCCCACCTA CCCCGCGCAC TCCCCGCGGG TGCAGCTCGA CCATGTGCTG GCCCGCGGGC CGGTAGGCAG GATCATCGCC GTGCAGGCCC GCCGCGTGCC CATCTCGGAT CACCTGGCGC TGTCCGTCGA CCTCGCCGAC CCGCGGGCCT GA
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Protein sequence | MRLGSFNIMH GLSLTDGTVE PARFAAAVSA LGVDVLGLQE VDLDQPRSGG LDLAAEAAAM IGAGDDDWRF VPTVFGTPGV GWRPADGQRR DDEPAYGIAL ISRLPVREWR VIDLGRAPVR SPIAIPGGPD RRGRLIMLDD EPRAAIAARV ESAGGPLTVV NTHLSFVPGW NAVQLRRLAR RLADVPGPLV LLGDLNLPGR LPAALTRWRR LAVTPTYPAH SPRVQLDHVL ARGPVGRIIA VQARRVPISD HLALSVDLAD PRA
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