Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3730 |
Symbol | |
ID | 3903833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4465366 |
End bp | 4466388 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637881057 |
Product | RNA-directed DNA polymerase |
Protein accession | YP_482811 |
Protein GI | 86742411 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3344] Retron-type reverse transcriptase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.70483 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAGTATG AAGTCACCAC GCCAACCGTC GCGGACAGGA TCGCCCAGAC GGTGGCGGCC GTGAGGCTGG AGGCGACGGT CGAACCGATC TTCCATCCGG GCTCCTACGG CTACCGGCCG GGAAGATCAG CCCTGGATGC GGTGGCGGCG TGCCGGCAAC GGTGCTGGAA GACAGACTGG GTGATCGACC TCGACATCCA GGAGTTCTTC GACAGCGTGC CGTGGGATCT CGTGGTCAAA GCCGTGGAGG CACACACCAG CGACCGTTGG GTGGTGCTGT ATGTGCAGCG GTGGCTGAAA GCACCGTTGC AGCTGCCCGA CGGGACCTTG CGTGCACGAG ACCGGGGGAC CCCGCAGGGC TCTTCGATCT CACCCGTGCT GGCGAACCTG TTCATGCACT ACGCGTTCGA CGCGTGGCTG GCCCGGACCT ACCCGGGCGT CGCGTTCGAG CGCTACGCCG ACGACGCGAT CGTGCACTGC GACAGCAGGA GTCGGGCTCG CCACGTGCTG GCCGCGCTCG ACGACAGGAT GGGACAGGTC GGACTGCGAC CGCACCCGAC CAAGACCAGG ATCGTGTACT GCAAGGACAG CAACCGGCGC GGCTCCCATG AGCACACGTC GTTCACGTTC CTCGGCTACA CCTTCCGCGC CCGCAAGGCA CGCAGCAGGC ACGGGAAGTT CTTCACGAAC TTCCTGCCCG CGATCAGCAA GGAAGCCCAG AAGAAGGTCA GCGGGCAGGT CCGCCGATGG CGGCTACACC TGCGGACCGG CCACACCCTC GACGAGCTGG CACGAAAGAT CAACCCGATC GTGCGCGGCT GGGCGCAGTA CTACGGGGCG TTCTACCGCT CCGCGCTGCT TCCCCTCCTA CAGCGCATCA ACGCCTACCT GGTGCGTTGG CTCCGCAAGA AGTACAAACG GCTGAGACCG TTCCATAAGG CCCTGGCCTG CTGGCAACGC ATCACCCGCC AACGCCCCGG GCTCTTCGCC CACTGGGCAT GGACGTCCAA CGCCTGGCGA TGA
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Protein sequence | MQYEVTTPTV ADRIAQTVAA VRLEATVEPI FHPGSYGYRP GRSALDAVAA CRQRCWKTDW VIDLDIQEFF DSVPWDLVVK AVEAHTSDRW VVLYVQRWLK APLQLPDGTL RARDRGTPQG SSISPVLANL FMHYAFDAWL ARTYPGVAFE RYADDAIVHC DSRSRARHVL AALDDRMGQV GLRPHPTKTR IVYCKDSNRR GSHEHTSFTF LGYTFRARKA RSRHGKFFTN FLPAISKEAQ KKVSGQVRRW RLHLRTGHTL DELARKINPI VRGWAQYYGA FYRSALLPLL QRINAYLVRW LRKKYKRLRP FHKALACWQR ITRQRPGLFA HWAWTSNAWR
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