Gene Francci3_3718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3718 
Symbol 
ID3903819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4450918 
End bp4451568 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content72% 
IMG OID637881044 
Producttranslation factor SUA5 
Protein accessionYP_482799 
Protein GI86742399 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0009] Putative translation factor (SUA5) 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGTT TCGACTGCTC TGACGAACGG GAGCGGGCCC GCGGTCTCGA CGCGGCGGTC 
AGCACCGTCG CCCGGGGCGG GCTGGTTGTG CTCCCCACCG ACACGCTCTA CGGGCTGGGC
GCCGACGCCT TCGATCGGGA CGCGGTGGCC TCGCTGCTGG CGGCAAAGGG GCGTGGCCGG
AACATGCCGG TTCCGGTCCT GGTCGGCTCC TGGCGCACCC TCGACGGGCT GATCGAGCGG
ATGACCCCCC AGGTCCGGGA GTTGATCACC GCATTCTGGC CGGGCGGGCT GACGCTGGTG
GCCCGGCACA CCCCGTCGCT GCGCTGGGAT CTCGGGGAGA GCCGGGGCAC GGTGGCGGTG
CGCATGCCCC TGCACCCGGT GGCGATCGAG CTGCTGGGTC GGACCGGGCC GATGGCCGTC
TCCAGCGCGA ACATCAGTGG CCAGCCTCCG GCGACGACGA TCGACGAGGC GCTGCACCAG
CTCGGCGGTG CCGCGGATGT CTATCTCGAC GGGGGACCGT GCCCGGCCGC CGTCCCCTCG
ACCATCGTCG ACTGCACCGG GGAGGTGCCC GTTGTACTGC GCAGCGGCGC GATTGGCCTC
ACCGCGCTGC GTGCGGTGCT GCCGCTGATC CGGGAGCCCG TGAACCGATG A
 
Protein sequence
MERFDCSDER ERARGLDAAV STVARGGLVV LPTDTLYGLG ADAFDRDAVA SLLAAKGRGR 
NMPVPVLVGS WRTLDGLIER MTPQVRELIT AFWPGGLTLV ARHTPSLRWD LGESRGTVAV
RMPLHPVAIE LLGRTGPMAV SSANISGQPP ATTIDEALHQ LGGAADVYLD GGPCPAAVPS
TIVDCTGEVP VVLRSGAIGL TALRAVLPLI REPVNR