| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3681 |
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| Symbol | |
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| ID | 3905365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4416474 |
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| End bp | 4418912 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637881007 |
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| Product | glycogen branching enzyme |
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| Protein accession | YP_482762 |
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| Protein GI | 86742362 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.024212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAACG GCGACGTCAA CAACGGCACG GCGCGGACGG GACGCCTGGC CACCGGGCTC
GCCCCCGACC GACCGAACCC CCGAGGGGCG GCCACCGCCG TCCGCAACGG CGGTGGCCGG
GTGGCGCTGG CGGACCGCGA CGCATCGTCC GCCAGCGCCC AGCCTGGACA GACCGCCGAC
GATCCCGCCG TGCCATCGGC CCCACCATCG GCCCCACCAT CGGCCCTGCC CGCAGACCCG
CCCGCGGTTG CGCCCGCGGT CTCGGTCGAC CTGCCCTACG ACGACCTGGA GCGGTTGGTC
AGCGGGGCGC ATCACGACCC GCACGCGCTG CTCGGGGCGC ACCCGCATCC CGGGAGCGAC
GCCACGGTCG TCCGGGTGCT GCGCCCCGAT GCGAGGGCCG TGACCGTCCT CGTCGGGCCG
GCCCGCTACC CGGCCACCCG GCTGCACAGC GGCGGGGTGT TCGGAGTGGC CGTGCCGGGA
ATGCTGCCCG ACTACCGCAT CGAGGTGACC TACCCGGACG GCCCGTACCT CATCGACGAC
CCCTACCGGC ACCTGCCCAC CCTCGGTGAG ATGGACCTCC ATCTGATCAT CGAGGGCCGG
CACGAACAGC TCTGGAAGGT GCTCGGGGCG CATCCGCGCG CGCTGACGAC GCCGGGCGGC
GCCACAGTCA CCGGGGTCAG CTTCGCCGTG TGGGCCCCCT CCGCGCGGGG AGTGCGGCTC
GTCGGCGATT TCGACTTCTG GGACGGGCGT GCCTTCCCGA TGCGCTCGCT CGGCCGCTCC
GGGATCTGGG AGCTGTTCGT CCCCGGCGCC GGCACCGGCG CCCGGTACAA GTACGAGATC
CTCGGCTTCG ACGGGATCTG GCGGCAGAAG GCGGATCCGC TGGCGTTCCA CACCGAGGTG
CCGCCGGCCA CCGCGAGCGT GGTGTTCGCC TCCGACTTCA CCTGGAACGA CGGCGCGTGG
CTCGACCGGC GGGCCCGGAC GGCCTGGCGC ACCGAGCCGG TGAGCGTCTA CGAGGTCCAC
CTGGGCTCCT GGCGGCGCGG GTTGTCCTAT CGGGAGCTCG CTGAGGAACT GACCGCGTAC
GTCGTCGAGA ACGGCTTCAC CCACGTGGAG ATGCTGCCCG TGGCCGAGCA TCCCTTCGGC
GGCTCCTGGG GCTACCAGGT GTCGGCCTAC TACGCCCCGA CGGCCCGCTT CGGCAGCCCC
GACGAGTTCC GCCACCTTGT GGACACGCTG CACCGCGCCG GCATCGGGGT GATCGTCGAC
TGGGTGCCGG CGCACTTCCC CCGGGACACC TGGGCGCTGG GCCGCTTCGA CGGCACCCCC
CTGTACGAAC ATCCCGATCC ACGCCGCGGT GAACAGCCCG ACTGGGGTAC CTACGTCTTC
GATCTGGGCC GCCCCGAGGT ACGCAACTTC CTCGTGGCAA ACGCCCTGTA CTGGTTCGAG
GAATTCCACA TCGACGGGCT ACGCGTCGAC GCGGTCGCCT CGATGCTGTA CCTCGACTAC
TCCCGGCCGG AGGGCGGCTG GCTGCCCAAC ATCCACGGCG GCCGGGAAAA CCTCGACGCC
GTCTCGTTCC TGCAGGAGAC CAACGCCACC GTCTACCGCC GTTTCCCGGG CGCAATGATG
ATCGCGGAGG AGTCGACCGC GTGGCCCGGG GTCACCCGCC CCACCCACCT CGGCGGCCTG
GGCTTCGGCT TCAAATGGAA CATGGGGTGG ATGCACGACA CCCTCGACTA CAACTCCCGG
CTGCCGATCC ACCGCATGTA CCACCACCAT CAGATGACCT TTTCGATGGT GTACGCCTAC
TCGGAGAACT TCATCCTGCC GTTCAGCCAC GACGAGGTGG TCCACGGCAA AGGTTCACTG
CTACGCAAGA TGCCCGGCGA CCGCTGGGCA CAGCTCGCGA ACCTGCGGGC GCTGCTCGCC
TACATGTGGG CGCATCCCGG CAAGAAGCTG CTCTTCATGG GCTGCGAGTT CGCCCAGGAC
AACGAGTGGA ACGAGTCCGC GTCCCTCGAA TGGCCCCTGC TGGACGATCC CGCCCACGCC
GGTGTCGCGG ACCTCGTGCG CGACCTGAAC GGTCTCTACC GGACGGTCCC GGCCCTGTAC
CAACACGACG CCGACCCGGC GGGCTTCTCC TGGATCGACG CGAACGACGC GGAGAACAAC
GTCTTCTCGT TCCTGCGGTG GTCGGGCGAG GACCCGGCGG GCGGCGTGCT GGCCTGCGTC
ACCAACTTCG CCGGCATCGG GCACGAGGGC TACCGCATCG GGCTGCCGTT CCCCGGCCGC
TGGCGCGAGA TACTCAACAC CGACGGGTAC CGCTACGGCG GCGGCAACAT CGGCAATCTC
GGCTCGGTCC AGGCTGTCGA GGAGCCGCAT CACGGTCTCG ACGCCTCAGC AACCCTGACG
CTGCCGCCTC TCGGGGCCAT CTGGCTCTCC CCCGCCTAG
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| Protein sequence | MNNGDVNNGT ARTGRLATGL APDRPNPRGA ATAVRNGGGR VALADRDASS ASAQPGQTAD
DPAVPSAPPS APPSALPADP PAVAPAVSVD LPYDDLERLV SGAHHDPHAL LGAHPHPGSD
ATVVRVLRPD ARAVTVLVGP ARYPATRLHS GGVFGVAVPG MLPDYRIEVT YPDGPYLIDD
PYRHLPTLGE MDLHLIIEGR HEQLWKVLGA HPRALTTPGG ATVTGVSFAV WAPSARGVRL
VGDFDFWDGR AFPMRSLGRS GIWELFVPGA GTGARYKYEI LGFDGIWRQK ADPLAFHTEV
PPATASVVFA SDFTWNDGAW LDRRARTAWR TEPVSVYEVH LGSWRRGLSY RELAEELTAY
VVENGFTHVE MLPVAEHPFG GSWGYQVSAY YAPTARFGSP DEFRHLVDTL HRAGIGVIVD
WVPAHFPRDT WALGRFDGTP LYEHPDPRRG EQPDWGTYVF DLGRPEVRNF LVANALYWFE
EFHIDGLRVD AVASMLYLDY SRPEGGWLPN IHGGRENLDA VSFLQETNAT VYRRFPGAMM
IAEESTAWPG VTRPTHLGGL GFGFKWNMGW MHDTLDYNSR LPIHRMYHHH QMTFSMVYAY
SENFILPFSH DEVVHGKGSL LRKMPGDRWA QLANLRALLA YMWAHPGKKL LFMGCEFAQD
NEWNESASLE WPLLDDPAHA GVADLVRDLN GLYRTVPALY QHDADPAGFS WIDANDAENN
VFSFLRWSGE DPAGGVLACV TNFAGIGHEG YRIGLPFPGR WREILNTDGY RYGGGNIGNL
GSVQAVEEPH HGLDASATLT LPPLGAIWLS PA
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