| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3679 |
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| Symbol | |
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| ID | 3905363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 4413069 |
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| End bp | 4414793 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637881005 |
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| Product | trehalose synthase-like |
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| Protein accession | YP_482760 |
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| Protein GI | 86742360 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | [TIGR02456] trehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTCTG AGCCTCTCAG CGAACCGATC GGCGACCACA CCCCCGGCCC GGCCCCCGCC
ATGCCGGTCG GGGGGACTTT ACGCGACCCA CACTGGTTCA AGCGAGCCGT GTTCTACGAG
GTGCTCATCC GCGGCTTCGC GGACTCCAAC GGCGACGGCA CGGGGGACAT TCGCGGCCTG
ATCTCCAGGC TCGACTACCT GGAGTGGCTC GGTGTCGACT GTCTGTGGCT GCTACCGATC
TACTCCTCGC CGTTGCGTGA CGGCGGCTAC GACATCAGTG ACTACTTTCA GATCCTGCCG
GAATTCGGTG ACCTCGGCGA CTTCGTTAGC CTGGTTGACG AGGCCCACCG CCGGGGCATC
CGGATCATCG CGGATCTGGT GATGAACCAC ACCTCGGACG CCCATCCCTG GTTCCAGGCG
TCCCGCTCCG ACCCCGACGG GCCGTTCGGG GACTTCTACG TCTGGTCCGA CAGCGACGAG
CTGTACCCGG ACGCCCGGAT CATCTTCGTG GACACCGAGA AGTCGAACTG GTCGTGGGAT
CCGGTCCGCG GTCAGTACTA CTGGCACCGT TTCTTCTCCC ACCAGCCCGA CCTGAACTAT
GACAACCCCG AGGTCCAGGA GGCGATGCTG GAGGTTCTGC GCTTCTGGCT CGATCTCGGC
ATCGACGGGT TCCGGCTCGA CGCGGTCCCC TACCTCTATG TCCGGGAGAA CACCAACGGC
GAGAACCTGC CGGAGACCCA CGAGTACCTC AAGCGGGTCC GCAAGGAGGT CGACGCCAAG
TACGCCGACC GGGTGCTGCT CGCCGAGGCA AACCAGTGGC CCTCCGACGT CGTCGAGTAC
TTCGGCAACG ACGACGAGTG CCACATGGCG TTCCACTTCC CGTTGATGCC GCGCATCTTC
ATGGCGGTCC GGCGGGAGTC CCGCTACCCA ATCTCGGAAA TTCTTGCTCA GACACCCCAG
ATCCCGCCGA ACTGCCAGTG GGGCATCTTC CTGCGCAACC ACGACGAGCT GACGCTCGAA
ATGGTGACCG ACGAGGAACG GGACTACATG TGGGCCGAAT ACGCGAAAGA TCCGCGTATG
AAAGCCAACA TCGGCATTCG TCGCCGGCTG GCGCCGCTGC TGGACAACAG CCGTGACCAG
ATGGAGCTGT TCACCGCGCT CCTGCTCTCG CTGCCCGGCT CGCCAGTGCT GTACTACGGC
GACGAGATCG GGATGGGCGA CAACATCTAC CTGGGCGACC GGGACAGCGT CCGGACTCCG
ATGCAGTGGT CACCGGATCG TAACGCCGGT TTCTCCACCG CGGACCCGGC CCGACTGTAC
CTTCCCCTGA TCATGGATCC GGTCTACGGT TATCAGGCCC TGAACGTCGA GGCCGGACAG
CGCATGCCGA CCTCGTTCCT GGCCTGGACC AAGCGGATGA TCGAGGTACG CAAGCGTCAT
CCGGTCTTCG GGCTCGGCGA CTACACCGAG CTCGGCGCGT CCAATCCCTC GATCTTCGCC
TTCGTCCGCG AGTTCGGCGA CGACCGGGTC CTGTGCGTCG CGAATCTGTC CCGCTTCGCC
CAGCCGGTGG AGCTCGATCT GCGTCGTTTC GAGGGAATGG TTCCGGTGGA GCTGCTCGGC
CGGGTGCACT TCCCGCCGAT CGGCGAGCTT CCCTACCTGC TGACACTGCC AGGTCACGGA
CATTACTGGT TCGCGGTGAC CAGACCGGGG GAATTCACCC CCTAG
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| Protein sequence | MDSEPLSEPI GDHTPGPAPA MPVGGTLRDP HWFKRAVFYE VLIRGFADSN GDGTGDIRGL
ISRLDYLEWL GVDCLWLLPI YSSPLRDGGY DISDYFQILP EFGDLGDFVS LVDEAHRRGI
RIIADLVMNH TSDAHPWFQA SRSDPDGPFG DFYVWSDSDE LYPDARIIFV DTEKSNWSWD
PVRGQYYWHR FFSHQPDLNY DNPEVQEAML EVLRFWLDLG IDGFRLDAVP YLYVRENTNG
ENLPETHEYL KRVRKEVDAK YADRVLLAEA NQWPSDVVEY FGNDDECHMA FHFPLMPRIF
MAVRRESRYP ISEILAQTPQ IPPNCQWGIF LRNHDELTLE MVTDEERDYM WAEYAKDPRM
KANIGIRRRL APLLDNSRDQ MELFTALLLS LPGSPVLYYG DEIGMGDNIY LGDRDSVRTP
MQWSPDRNAG FSTADPARLY LPLIMDPVYG YQALNVEAGQ RMPTSFLAWT KRMIEVRKRH
PVFGLGDYTE LGASNPSIFA FVREFGDDRV LCVANLSRFA QPVELDLRRF EGMVPVELLG
RVHFPPIGEL PYLLTLPGHG HYWFAVTRPG EFTP
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