Gene Francci3_3677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3677 
Symbol 
ID3905361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4409767 
End bp4410342 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content67% 
IMG OID637881003 
Productstress protein 
Protein accessionYP_482758 
Protein GI86742358 
COG category[T] Signal transduction mechanisms 
COG ID[COG2310] Uncharacterized proteins involved in stress response, homologs of TerZ and putative cAMP-binding protein CABP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.941733 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGAGTCA GCCTCAGCAA GGGCGGCAAC GTGTCGCTGA CCAAGGAGGC GCCCGGACTC 
ACCAACATCC TGGTCGGGCT CGGCTGGGAC GTTCGGAGCA CAACCGGCGC GGACTTCGAC
CTGGACGCGA GCGCCATCGC GTGCCGGGCC GACGGCAAGG TCGTGTCGGA CGGGCACTTC
GTCTTCTTCA ACAACCTCAA GAGCCCCGAC GGTGCGATCG AGCACCAGGG CGACAACCTG
ACCGGCGAGG GTGAGGGCGA CGACGAGGCC ATCACGGTGA ACCTCACATC CCTGCCGGCG
GAGATTGACA AGATCGTCTT CCCGGTTTCG ATCTATGACG CGGACTCGCG GCAGCAGAAC
TTCGGCCAGG TCCGCAACGC CTTCATCCGG ATCGTCAACG GCGCCGGCGG CAGCGAGATC
GCCCGCTATG ACCTCACCGA GGACGCCTCC ACCGAGACGG CCATGGTGTT CGGCGAGGTC
TACCGGCACG GCGCGGACTG GAAGTTCCGA GCCGTCGGAC AGGGCTACGC CTCGGGTCTG
GCCGGGATCG CGCGCGACTT CGGCGTCAAC GTCTGA
 
Protein sequence
MGVSLSKGGN VSLTKEAPGL TNILVGLGWD VRSTTGADFD LDASAIACRA DGKVVSDGHF 
VFFNNLKSPD GAIEHQGDNL TGEGEGDDEA ITVNLTSLPA EIDKIVFPVS IYDADSRQQN
FGQVRNAFIR IVNGAGGSEI ARYDLTEDAS TETAMVFGEV YRHGADWKFR AVGQGYASGL
AGIARDFGVN V