Gene Francci3_3676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3676 
Symbol 
ID3905360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4408192 
End bp4409364 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content67% 
IMG OID637881002 
Producthypothetical protein 
Protein accessionYP_482757 
Protein GI86742357 
COG category[S] Function unknown 
COG ID[COG2899] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.721107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGCCT TGCGAATCTT CGGATGGTCC TTGGCGATCA CCGTTATCGG GGTGGCCGCG 
GCGGGGGTGA TCGGTGGCCC CAGGAACGCG GCGCTCGTCG CGATCCTCGC GGTGCTCGAG
ATCAGTTTGT CCTTCGACAA CGCCGTCATC AACGCGACGA TCCTCGGCCG GATGAGCCAG
TTCTGGCAGA GGATCTTCCT GACGCTCGGC ATCCTGATCG CGGTGTTTGG CATGCGTCTG
ATCTTCCCGA TCGCCATCGT GGCGCTGACC GCGCATCTCG GTCCGCTCGA GGTCTTCGAC
CTGGCGCTGA ACGACGGTGC CCGGTACGCG GAGAAACTGG GTGACGCGCA TCCGGCCATC
GCCGCGTTCG GCGGGATCTT CCTGTTCATG CTGTTCCTGG ACTTCCTGTT CGACCCCGAA
CGGGAGATCC AGTGGATCAA GAAGCTGGAG GAGCCGCTGC GCAGGGCGGG CCAGCTCGAT
GTGGTTCCGA TCGTGCTTGG GCTCATCGCC CTGCTGGTGG TCGGCCAGGC CTTCGCCGGC
GACCACCAGC AGCAGGTGCT GCTCTCCGGG GTGGCGGGGC TCGCGACCTA TCTGGGCGTG
CGGGGACTCG GCGAGTTCTT CGAGGCCCGC GGTGTGGGCG CCGAGGACGA TGACGACGAT
TCCGTCGCCG AGTCGGCAGG CTTGGCCCCG GTCCGGTCGA ACGGTACCGG CGGCCCGCCG
AAGTTGGTGC TCGCCACCGG CAAGGCCGCC GCGTTCCTCT TCCTCTACCT CGAGGTCATC
GACGCGTCGT TCTCGTTCGA CGGAGTCGTC GGCGCCTTCG CGATCTCCCA GAACATCTTC
GTCATCGCGG CCGGTCTCGG GATCGGCGCG ATGTACATCC GGTCCCTGAC CGTCTACCTG
GTCCGGCGGG GCACTCTCGG CGAGTACATC TACCTCGAGC ACGGTGCCCA CTATGCGATC
GGGGCGCTGG CCATCATCCT GGCCATCTCG ATCGAGACCG AGGTTCCGGA GATCGTCACC
GGTCTCATCG GGGTGGCCTT CATCGGTCTG TCGCTGCTGT CCTCCATCCG CCACCGGTCC
GCCGAGCGCG GTTTGGCGGG TGCCGGGTCC GTCCCGGGCG AGGACGAGGG CGGCCCGGGG
CAGCCACGAG AGGCCGTCGG CGCCCCGATG TAG
 
Protein sequence
MHALRIFGWS LAITVIGVAA AGVIGGPRNA ALVAILAVLE ISLSFDNAVI NATILGRMSQ 
FWQRIFLTLG ILIAVFGMRL IFPIAIVALT AHLGPLEVFD LALNDGARYA EKLGDAHPAI
AAFGGIFLFM LFLDFLFDPE REIQWIKKLE EPLRRAGQLD VVPIVLGLIA LLVVGQAFAG
DHQQQVLLSG VAGLATYLGV RGLGEFFEAR GVGAEDDDDD SVAESAGLAP VRSNGTGGPP
KLVLATGKAA AFLFLYLEVI DASFSFDGVV GAFAISQNIF VIAAGLGIGA MYIRSLTVYL
VRRGTLGEYI YLEHGAHYAI GALAIILAIS IETEVPEIVT GLIGVAFIGL SLLSSIRHRS
AERGLAGAGS VPGEDEGGPG QPREAVGAPM