Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3566 |
Symbol | |
ID | 3904505 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 4264778 |
End bp | 4265491 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 637880887 |
Product | hypothetical protein |
Protein accession | YP_482647 |
Protein GI | 86742247 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00683826 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTGCAAAG CTGCGACGGT GGATCCGGCG AACCTCACCC ACGCCTCCCG ACGACGGCTC CTCACCGGGC TGACCAGCCT TGCCCTTACC GGATTCGCCG GATTTGCCGG ATTCGAGGCC GCCGGCTGCA GCACCACGGT CACGACGAAT CGGACCGGTC CCGCGGTGGG TCCGGACGGC GACGACCGCC GGGCGGCGAG GGCCGCCGCC GTCCGGGCGG CCGCGCTGGC CGCGGCGTAC CGGACGGCGG CCGAGCGCCA CCCGTCCCTG CGTCCCCTGT TCGACACGCT GCGGGCCCAT CACGAGGTCC AGCTCCGGAC CTTGGCCGAA CAGTTCCCGG GCTCCGCACC GGCCACCCCG ACCCAGGCGA CCACCCCGAC CCAGGCAGCC ACCCCGACCC AGGCGACCAC CCCGACCCAG GCAGCCACCC CGACCCAGGC AGCCACCCCG ACCCAGGCAG CCACCCCGAC CCAGGCGATC GGGCGTGACG GCGCCGGGAC GGCGGGAACG GCGCAGCTCG TCAACGAGTC ACCCACGGCC CGCGCCGCCA CCCTCGCCTC CCTGACCGGG ATGGAGGGTG CGGCGACGAA CGCCGCCCGC ACCGACTGCC TGCGCGCGGG CGGTCCGCTC GCGTCCCTGC TGGCGAGCAT GTGCGCCGCC GGGACCGCGC ATGCGGAGCT GCTGGCCCTC GCTGCGAGCC GGGTGTCCGG ATGA
|
Protein sequence | MCKAATVDPA NLTHASRRRL LTGLTSLALT GFAGFAGFEA AGCSTTVTTN RTGPAVGPDG DDRRAARAAA VRAAALAAAY RTAAERHPSL RPLFDTLRAH HEVQLRTLAE QFPGSAPATP TQATTPTQAA TPTQATTPTQ AATPTQAATP TQAATPTQAI GRDGAGTAGT AQLVNESPTA RAATLASLTG MEGAATNAAR TDCLRAGGPL ASLLASMCAA GTAHAELLAL AASRVSG
|
| |