Gene Francci3_3566 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_3566 
Symbol 
ID3904505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp4264778 
End bp4265491 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content76% 
IMG OID637880887 
Producthypothetical protein 
Protein accessionYP_482647 
Protein GI86742247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00683826 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCAAAG CTGCGACGGT GGATCCGGCG AACCTCACCC ACGCCTCCCG ACGACGGCTC 
CTCACCGGGC TGACCAGCCT TGCCCTTACC GGATTCGCCG GATTTGCCGG ATTCGAGGCC
GCCGGCTGCA GCACCACGGT CACGACGAAT CGGACCGGTC CCGCGGTGGG TCCGGACGGC
GACGACCGCC GGGCGGCGAG GGCCGCCGCC GTCCGGGCGG CCGCGCTGGC CGCGGCGTAC
CGGACGGCGG CCGAGCGCCA CCCGTCCCTG CGTCCCCTGT TCGACACGCT GCGGGCCCAT
CACGAGGTCC AGCTCCGGAC CTTGGCCGAA CAGTTCCCGG GCTCCGCACC GGCCACCCCG
ACCCAGGCGA CCACCCCGAC CCAGGCAGCC ACCCCGACCC AGGCGACCAC CCCGACCCAG
GCAGCCACCC CGACCCAGGC AGCCACCCCG ACCCAGGCAG CCACCCCGAC CCAGGCGATC
GGGCGTGACG GCGCCGGGAC GGCGGGAACG GCGCAGCTCG TCAACGAGTC ACCCACGGCC
CGCGCCGCCA CCCTCGCCTC CCTGACCGGG ATGGAGGGTG CGGCGACGAA CGCCGCCCGC
ACCGACTGCC TGCGCGCGGG CGGTCCGCTC GCGTCCCTGC TGGCGAGCAT GTGCGCCGCC
GGGACCGCGC ATGCGGAGCT GCTGGCCCTC GCTGCGAGCC GGGTGTCCGG ATGA
 
Protein sequence
MCKAATVDPA NLTHASRRRL LTGLTSLALT GFAGFAGFEA AGCSTTVTTN RTGPAVGPDG 
DDRRAARAAA VRAAALAAAY RTAAERHPSL RPLFDTLRAH HEVQLRTLAE QFPGSAPATP
TQATTPTQAA TPTQATTPTQ AATPTQAATP TQAATPTQAI GRDGAGTAGT AQLVNESPTA
RAATLASLTG MEGAATNAAR TDCLRAGGPL ASLLASMCAA GTAHAELLAL AASRVSG