| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3540 |
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| Symbol | |
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| ID | 3904479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4228558 |
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| End bp | 4230129 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637880861 |
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| Product | hypothetical protein |
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| Protein accession | YP_482621 |
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| Protein GI | 86742221 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.309547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.223285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCACAC GCCTCCATCG CCGGGTAGCT CTGATCACGC TCGGTTGTTC CCGGAACGAG
GTGGATTCGG AGGAGCTGGC CGCCCGGCTC GGCGCGGACG GGTGGGAGCT CGTCTCCGAC
GCCGCCGACG CCGACGCCGT GCTCGTCAAC ACCTGCGGAT TCGTCGACGC GGCGAAGAAG
GACTCCATCG ACGCTCTGCT TGCGGCGGAC GGCCTGCGGG CCGGTGGCGG TCCGTCCGGT
CCCGCGGACG GCGCCGGCCC GGGTCCGCGC GCGGTGGTGG CCGTGGGCTG CCTGGCCGAG
CGTTACGGAA CCGAGCTCGC CGAGAGCCTG CCCGAGGCGG ACGCGGTCCT CGGATTCGAT
GCCTATCCGA ACATCGCCAC GCACCTCGCG GCCGTGCTGG CCGGTACCCC GGTGCCCGCG
CACTCCCCGC GTGACCGGCG GACGATGCTG CCGATCACCC CGGTGGACCG GGCCGCCCCC
GCTCTCCCGC CGGCCGCGGT GTCCACCGGA GCCGTTCCGC TGCGCCGGCG GTTGACGGCC
GGGCCGGTCG CCGTCCTGAA GATCTCCAGC GGGTGTGACC GGCGCTGCGC CTTCTGCGCG
ATCCCGTCGT TCCGCGGCTC CCACGTCTCG CGGTCACCCG ACGACGTGCT CGCCGAGGCC
GAATGGCTGG CCGGTCAGGG TGCCCGCGAG CTGGTCCTGG TCAGCGAGAA CTCCACCTCC
TACGGCAAGG ACCTCGGGGA TCTGCGCGCG CTGGAGAAGC TGCTGCCGCA ACTCGCGGCG
GTGTCGGGCA TCGTCCGGGT GCGCACGGTC TACCTGCAGC CCGCCGAGAT GCGTCCGTCG
CTGCTCGAGG TGCTGCTGAC CACTCCGGGC CTCGCGCCCT ATCTCGATCT GTCCTTCCAG
CACGCGAGCC CGCCGGTGCT GCGCCGGATG CGCCGCTTCG GTGGCAGTGG GCACTTCCTC
GACCTGCTCG CCCGCGCCCG CGCGCTGGCG CCCGAGCTGG GGGCGCGATC CAACGTCATC
GTCGGGTTCC CGGGGGAGAC CCCCGAGGAT GTCGACATCC TCGCGGAGTT CCTCGAGGCC
GCCGAGCTCG ACGCCGTCGG CGTGTTCGGC TACTCCGACG AGGAGGGTAC CGAGGCCGCC
GGGCTGACAG ACAAGATCCC CGATGAGCTG ATCGAGCGCC GCCGGGTACG CGTCACCGAC
CTCGTCGAGC AGCTGACCGC CGCCCGGGCG GACGCGCGGA TCGGCTCCCG GGTACAGGTC
CTGGTGGAGG AGGTCGCCGG TGGTCTGGCC ACCGGCTGCG CCGCCCACCA GCAGGCGGAG
GTCGACGGCG GGTGCGTCGT GCGACTGTCC CCGGGCGGCG CGGCGGATGA CGGGCCGGAG
CGCCTCGGGG TGGGGGATCT CGTCGGGGTG GGGGATCTCG TCGAGGCCCG GGTGGTCGCC
ACCGAGGGTG TCGATCTGAT CGCGGAGTTC ATCGCGGTGC TCGATCGGGC CCGTCCCACG
GCTGCGGTCG CGCGGCCGAC GCCGGACCGG GCGGCGGCCC TCGTGGGCCG GGGCGTCGCG
GATGGGACGT GA
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| Protein sequence | MSTRLHRRVA LITLGCSRNE VDSEELAARL GADGWELVSD AADADAVLVN TCGFVDAAKK
DSIDALLAAD GLRAGGGPSG PADGAGPGPR AVVAVGCLAE RYGTELAESL PEADAVLGFD
AYPNIATHLA AVLAGTPVPA HSPRDRRTML PITPVDRAAP ALPPAAVSTG AVPLRRRLTA
GPVAVLKISS GCDRRCAFCA IPSFRGSHVS RSPDDVLAEA EWLAGQGARE LVLVSENSTS
YGKDLGDLRA LEKLLPQLAA VSGIVRVRTV YLQPAEMRPS LLEVLLTTPG LAPYLDLSFQ
HASPPVLRRM RRFGGSGHFL DLLARARALA PELGARSNVI VGFPGETPED VDILAEFLEA
AELDAVGVFG YSDEEGTEAA GLTDKIPDEL IERRRVRVTD LVEQLTAARA DARIGSRVQV
LVEEVAGGLA TGCAAHQQAE VDGGCVVRLS PGGAADDGPE RLGVGDLVGV GDLVEARVVA
TEGVDLIAEF IAVLDRARPT AAVARPTPDR AAALVGRGVA DGT
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