Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3525 |
Symbol | recA |
ID | 3904464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 4210237 |
End bp | 4211274 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637880847 |
Product | recombinase A |
Protein accession | YP_482607 |
Protein GI | 86742207 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0468] RecA/RadA recombinase |
TIGRFAM ID | [TIGR02012] protein RecA |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.551254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0703421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGAC TCGACCGTGA GAAGGCGTTG GATAACGCCT TGGCGCAGAT CGACAAGCAG TTCGGCAAGG GATCGGTCAT GCGGTTGGGG GACGACACCA GGCCGCCGGT CCAGGCCATC CCCACCGGTT CGATTGCTCT GGATGTCGCG CTCGGCATCG GCGGGCTGCC GCGGGGGCGC ATCATTGAGA TCTACGGCCC GGAGTCGTCC GGGAAGACGA CCGTCGCCCT GCACGCGGTG GCGAACGCGC AGGCGGCTGG TGGTATCGCG GCGTTCATCG ACGCCGAGCA CGCGCTCGAC CCCGAGTACG CGGGAAAGCT CGGCGTCGAC ACCGACGGTC TGCTGGTCTC CCAGCCTGAT ACCGGCGAGC AGGCGTTGGA GATCGCGGAC ATGCTCGTCC GGTCTGGCGC GCTGGACATC ATCGTCATCG ACTCGGTGGC CGCGCTGGTC CCGAGGGCCG AGATCGAGGG CGAGATGGGG GACAGTCACG TCGGCCTCCA GGCCCGCCTG ATGTCCCAGG CCCTGCGCAA GATGACCGCG GCGCTGGCGA ACTCCGGTAC GACCGCGATC TTCATCAACC AGTTGCGCGA GAAGATCGGG GTGATGTTCG GCTCCCCGGA GACCACGACC GGTGGTAAGG CACTGAAGTT CTATGCGTCG GTGCGCCTCG ATGTCCGTCG TATCGAAACT CTCAAGGACG GCACGGAGGC CGTGGGTAAC CGGACCCGCG TCAAGGTGGT GAAGAACAAG GTGGCGCCGC CGTTTCGGAC CGCCGAATTC GACATCGTCT ACGGAGGCGG TATCAGTCGG GAGGGTTCCC TGATCGACAT GGGTGTCGAG CACGGCATTA TTCGTAAGTC CGGTGCCTGG TACACCTACG ACGGCGATCA GCTCGGCCAG GGCAAGGAGA ACGCCCGGTC TTTTCTGCGG GACAACCCCG ATCTGGCCAA CGAGATCGAA AAGAAGATCA AGGAGAAGCT CGGCATCCTG CCCAGTCTCG AATCCGATGC CGTGGCGCCC GTTCCGGTCG ATCTGTAG
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Protein sequence | MAGLDREKAL DNALAQIDKQ FGKGSVMRLG DDTRPPVQAI PTGSIALDVA LGIGGLPRGR IIEIYGPESS GKTTVALHAV ANAQAAGGIA AFIDAEHALD PEYAGKLGVD TDGLLVSQPD TGEQALEIAD MLVRSGALDI IVIDSVAALV PRAEIEGEMG DSHVGLQARL MSQALRKMTA ALANSGTTAI FINQLREKIG VMFGSPETTT GGKALKFYAS VRLDVRRIET LKDGTEAVGN RTRVKVVKNK VAPPFRTAEF DIVYGGGISR EGSLIDMGVE HGIIRKSGAW YTYDGDQLGQ GKENARSFLR DNPDLANEIE KKIKEKLGIL PSLESDAVAP VPVDL
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