| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3496 |
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| Symbol | |
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| ID | 3905230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4167916 |
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| End bp | 4169376 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880818 |
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| Product | cell envelope-related transcriptional attenuator |
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| Protein accession | YP_482578 |
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| Protein GI | 86742178 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.625789 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.409021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTGGC CTCCGGATCG TCCGGATCGT CCGGAACGGT ACGGGCCGAC GGCGGGACGC
CGGGACGGCG AGCGGCCTGG CCGGTCCGTC CGTGACCCGC GGGACCCACG CCGGGCCCCT
GAGGAGGACT GGCCCGTCGG GCAGTGGCCG CGCCGGGAGC ACCGGCCCGC TCCGCGGGGT
CACGATGATG ACGAGCCGCG CGTACCCCCC GGCGCCTACC CCGATCCCTA CGGCCGGTAC
CCCATCGATC ACCCGGCGGC CGAGCCCCGG TATGACCGGC CGGCCCCGGA GGGTCCCGTG
GCACCCGGGC AGGGCGGCTT ACGGCGCGGT CTCACCGCCA TGGCCGCGGT GTTGGCGACC
CTCGTCCTGA TCCTGGCGAC CGGTGGCTGG GCCGTGCTGA AGCACTACGA CGGTAGGGTG
CATCACATCC CGCTGGCCTT CTCCGCCAGC GCGGACCGGC CGGCGTCCGC ATCGGGCGGA
ACGCAGAACA TCCTGCTCGT GGGGTCGGAC ACTCGGACGG GGACCAACGG CGAGTTCGGC
CAGGTCGAGG GGCAGCGGTC GGACACGACC ATCCTCGCCC ACCTCGACGG CGACGGTTCG
ACGACTCTCA TCTCCTTCCC CCGGGATCTG TGGGTGCGGA TTCCCGCGTA CACCGACGCG
GCGGGCACGC AGCACGCGGC GCAGCGGTCC AAGCTGAACG CCGCCTTCTC CTACGGCGGG
CCGTCCCTGC TCGTGGCCAC GATCGAGAAC CTCACCGGGA TCCGGGTCGA CCACTACGTT
CAGATCGACT TCATCGGCTT CCAGGGGATG ACGGACGCCC TCGGCGGGGT CACCGTCTGC
ATCAAGGAGC TTCCCCCCGA GCTGAAGGCA CGGGGTTTCG ACAACCTGCA CGACCATTAC
TCCGGGTTTT CCGGTCAGGT CGGCGAGAAC ACGCTGAACG GGGCGCAGGC CCTCTCCTTC
GTCCGGCAGC GGTATGGCCT ACCCGAGAGC GACATCGACC GCATCCGCCG CCAGCAGCAG
TTCCTCGGTG CCGTCTTCCA GCGGATCGCG TCGACGGACA CCCTGCTCAA CCCGGCGAAG
CTGCTCGGGG TGGTCGACTC CGCCACCTCG GCGCTGACGC TCGACGAGGC CACCTCCCTC
GCCGACCTCC GGTTTCTCGC GGTGCGGATG CAGTCGATCG GATCGGGCGG CGTCGCGTTC
ACGACGGTGC CGGCGGCAGC TGGCACCCGC GGGGGGCAGA GCGTCCTAGT TCCTGATCCA
GCCCAGCTGG GCACCTTCCT CAAGCCCTTC GGCGGTCGTG TCGCCGACGG GAGCTCCACC
GGCGCACTCC CGGCCGGCGC GGGGGGTGGC TCCTTCGCCG CGGTACCGGT GTCCGCCGCG
GTACCGGTGG TCTGGTCCCC GACCAGCGCG GCGGGAAGGT CCGTCCCGGG TGACGCGGGC
GGGGTGTCCT GCACCTATTG A
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| Protein sequence | MTWPPDRPDR PERYGPTAGR RDGERPGRSV RDPRDPRRAP EEDWPVGQWP RREHRPAPRG
HDDDEPRVPP GAYPDPYGRY PIDHPAAEPR YDRPAPEGPV APGQGGLRRG LTAMAAVLAT
LVLILATGGW AVLKHYDGRV HHIPLAFSAS ADRPASASGG TQNILLVGSD TRTGTNGEFG
QVEGQRSDTT ILAHLDGDGS TTLISFPRDL WVRIPAYTDA AGTQHAAQRS KLNAAFSYGG
PSLLVATIEN LTGIRVDHYV QIDFIGFQGM TDALGGVTVC IKELPPELKA RGFDNLHDHY
SGFSGQVGEN TLNGAQALSF VRQRYGLPES DIDRIRRQQQ FLGAVFQRIA STDTLLNPAK
LLGVVDSATS ALTLDEATSL ADLRFLAVRM QSIGSGGVAF TTVPAAAGTR GGQSVLVPDP
AQLGTFLKPF GGRVADGSST GALPAGAGGG SFAAVPVSAA VPVVWSPTSA AGRSVPGDAG
GVSCTY
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