| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3472 |
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| Symbol | |
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| ID | 3905206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 4139278 |
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| End bp | 4141125 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880794 |
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| Product | protein-tyrosine kinase |
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| Protein accession | YP_482554 |
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| Protein GI | 86742154 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0489] ATPases involved in chromosome partitioning
[COG3944] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGCTGC GCGACTACGT CCGTGTTCTG CGCCGAAGCT GGACGATCAT GATCGCCGGC
GTGGTCCTCG GCGGGCTGCT GGCCGCCATG GCGACCTGGC GAACGACGAA AGAGTACGCC
GCCTCGGTGA CGATGGTCGT CTCCTCGCCG GACAGGGGCG CCGGAGCCGC CTCGGCCTAC
CAGGGAGGCC TGCTCTCCCA GCAACGCGTC AAGTCCTATG CCGACCTGGT GGCCAGCGAG
CGGGTGGCGA CGGCCGTGAT CGCACGCCTG CACCTGCACG CGACTCCGGA GGCCCTGCGG
GCCCAGATCA GCGCGCACGC CGTCCCGGAC ACCGTGCTGC TCCAGGCCGT CGTGCGCGAT
TCCGACCCGA GACGAGCCAT GATCATCGCA GATGCTGTCG GTGAGACGTT CTCCACCACC
ATTGCGAAGA TCGAGACGCC GTCGGCCGAC GAACCACCCT CCGTGCGGGT GACTGTCTGG
GAACACGCGA AGCTGCCCGT CTCGCCCGTC TCGCCCCAGC CGATCCGCAA CCTCGCGCTC
GGAGCGCTGC TCGGGCTGAT CGTCGGCAGC GCCGCCGGGA TCGTCCGATA CCGCCTCGAC
ACGAGCGTGT CCAGTGAGGA CGACGCCCGT GAGACGACCG AGCTGCCCAA CCTCGCCGTC
ATCGGCTACG ACGGTGCCGC CGACCGGCAT CCCCTCATCA TCAACGCCAA GCCCCGCTCG
GCCCGGGCGG AGGCGTTCCG CCAGCTGCGG ACCAACCTGC AGTTCGTCGA GGTGGACACC
GGACCTCGAT CGATCCTGGT GAGCAGTGCG GTCCCCGGCG AGGGCAAGAC CACCGTGGCC
TGCAACCTCG CGATCACCCT GGCGCAGGGC GGTGCGCGGG TCTGCCTGAT CGAGGGGGAC
CTGCGACGGC CGTCGTTCGG CGAGTACCTC GGGGTCGAGT CCGCCGCCGG GCTCACCTCG
GTCCTCATCG GCGCCGCGGA CCTCGACGAC GTCCTGCAGC CCTGGGGGGA GGGTCGGGTC
GGGGAGGGGC GCGTAGAGGT CCTCGCCAGC GGCCCCATCC CGCCGAATCC CAGCGAGCTG
CTCGGCTCCA AGGGCATGGC CGGACTCATC AACCTGCTGT CCGCCCGCTT CGACATCCTC
CTGGTCGACG CCCCGCCCCT GCTACCGGTG ACTGACGCGG CCGTGCTCGC CACCCGGGTC
GAGGGGGTTC TGCTGGTGAC GCGGGCCGGG CGGACCCGCC GCGAGCACCT CCGGCGGGCC
GTCGAGGCGC TGCGGGCGGT CGACGCCCGG ATGATCGGCA CCGTGCTGAA CATGGTGCCG
GTCAAGGGAC CCGACGCCTA CGACTACGGC CCGGGCGACG GTTACGTGTC ACGCGGCCGG
CACGCCAGGA CCTCCTCGCC CCGAACCCTG GAGATCCCGG CGCCCGATTC CGGGGTCCGG
CCTGCTTGGC CGGTCACCTC GCCTCCGTCG CTGCCGTCAC CGGCTCCTTC TTCTCCGGCT
CCTGCTTCTC CGGCTTCGGC CGTGACGCCG GTTCCCGCCG CCACGGCGCG TCTCGGGATA
GCCGACGGTG GCGACGAGTC GAGCTCGGCG CGGGACCCGC TGCCCGACGG CGCCACGACT
GTCCCGAGCG CCACGACTGT CCCGAGCGCC ACGACTGTCC CGAGCGCCAT GACTGTCCCG
AGCGCCACGA CTGTCCCGAG CGGCGGACCG CACGTCAGGG TGCCGGCGGC ACGCGGATCG
GCCGAGGAGA TCATCTCCGT CGGTGGAAGG ACACCGCGCG GTACGGACCC GGCTGGCGGG
ACGACGCCGG ATGACAACGG CGCGACCCGG CCGCCGTCCT CCCCATGA
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| Protein sequence | MELRDYVRVL RRSWTIMIAG VVLGGLLAAM ATWRTTKEYA ASVTMVVSSP DRGAGAASAY
QGGLLSQQRV KSYADLVASE RVATAVIARL HLHATPEALR AQISAHAVPD TVLLQAVVRD
SDPRRAMIIA DAVGETFSTT IAKIETPSAD EPPSVRVTVW EHAKLPVSPV SPQPIRNLAL
GALLGLIVGS AAGIVRYRLD TSVSSEDDAR ETTELPNLAV IGYDGAADRH PLIINAKPRS
ARAEAFRQLR TNLQFVEVDT GPRSILVSSA VPGEGKTTVA CNLAITLAQG GARVCLIEGD
LRRPSFGEYL GVESAAGLTS VLIGAADLDD VLQPWGEGRV GEGRVEVLAS GPIPPNPSEL
LGSKGMAGLI NLLSARFDIL LVDAPPLLPV TDAAVLATRV EGVLLVTRAG RTRREHLRRA
VEALRAVDAR MIGTVLNMVP VKGPDAYDYG PGDGYVSRGR HARTSSPRTL EIPAPDSGVR
PAWPVTSPPS LPSPAPSSPA PASPASAVTP VPAATARLGI ADGGDESSSA RDPLPDGATT
VPSATTVPSA TTVPSAMTVP SATTVPSGGP HVRVPAARGS AEEIISVGGR TPRGTDPAGG
TTPDDNGATR PPSSP
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