| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3188 |
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| Symbol | |
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| ID | 3903914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3777595 |
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| End bp | 3778305 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637880512 |
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| Product | ribulose-5-phosphate 3-epimerase |
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| Protein accession | YP_482274 |
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| Protein GI | 86741874 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000178171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.191395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCG CGCAGATCTA CCCCAGCCTG CTCGCCGCCG ACTTCGGCCG GATCGCCGAC
GCGGCCCTGG CGGTCGAGGG GCAGGCCGAC TGGCTGCACG TCGACGTGAT GGACTACCAC
TTCGTCCCGA ACCTGGCGTT CGCGCCGGAC ACGGTGACGG CCCTGCGCGC GGTGACGGAT
ACTCCGCTTG ACTGCCATCT CATGATCGAC GATCCCGACC GCTGGGCGGC CGGGTACGCC
GAGCGCGGCG CGGCGAACGT CACCATTCAC GCCGAGGCCG TGTCCGACCT GCCCCGCACC
ACCAGGGCGA TCCGGGCGGC CGGGGCCCGC ACCGGCCTCG CTGTGAAGCC GAACACCCCG
GTCGAGCACT ATCTCGACGA CCTGCACCGG TTCGACCTGC TGCTGCTGAT GACCATCGAG
CCGGGTTTCG GCGGTCAGAC GTTCATGACC GAGGTGTTGC CGAAGATCGA GGCCGCCCGG
CGCCTGCTCG ACGCCCGTGG GCTGGACCTG TGGCTGCAGA TCGACGGCGG GGTCAACGCC
GGGACGATCG AGCGGGCCGC GGTGGCGGGT GTGGACGTGT TCGTCGCCGG CACGGCCGTC
TTCGGGGCGG CCGATCCGGG CCAGGCCGTC GAGCGGCTGC GTGAGCAGGC GCTGCGGGCG
GCGCCCCGGC TGTCCCCGCC CGCGCCACGC TCGGCGGTCG GGCCGGCGTG A
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| Protein sequence | MATAQIYPSL LAADFGRIAD AALAVEGQAD WLHVDVMDYH FVPNLAFAPD TVTALRAVTD
TPLDCHLMID DPDRWAAGYA ERGAANVTIH AEAVSDLPRT TRAIRAAGAR TGLAVKPNTP
VEHYLDDLHR FDLLLLMTIE PGFGGQTFMT EVLPKIEAAR RLLDARGLDL WLQIDGGVNA
GTIERAAVAG VDVFVAGTAV FGAADPGQAV ERLREQALRA APRLSPPAPR SAVGPA
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