Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_3166 |
Symbol | |
ID | 3903888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 3745624 |
End bp | 3747588 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 637880487 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_482252 |
Protein GI | 86741852 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.307175 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.31292 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAGGG AAGACAGATC CAGTCAGCGA GGCGGGACGA CGCCGTTCAC GTCCCCACAC CCGCAGCGGC GTGATCGGGA CGCTTCAGGT GATCGTGGCA CGCCGGCAGA GGGACGTCGC GCCGGGCGCC CGGTGCGTGG CGATGCCCCG GGCGTAAGGC GGGGCGGCGG ATCCGAGACC GGCGCGTCGC GCGGACAGGG GGGTCCCTCT CAGGGCGCGC GCCAGGGTGC GCGCGGCGGC GGGCAGGGCG GTGCGCGGGG AGGAACGCGG GGCGGGGCGG GCCAGTTCCG CCGCGGCCCG GAGGGCCAGG GCCGGCCGGA CCGCTCCAGG GGTTCGGACT CCAACACCCG GTACGGCAAC GCCCGGTACG GCGCATCGCC GCGTGCGGGC GATGCGGGAT CCGCCACTTC CTCTTCCTCC TCGGCCGCCT CGTTCGTCGA CCGCCGCCCG GGTGGGGCTC GGCGTCCGGA GGGGACGGGG ACCGGCGGTG GGCGTGCTCC GGCGGCTGGC GGTGAGCGCT TTTCCCGAGC CGGCGGCCCG CGCGGTGACC GGGGCGCGAG CGGTGACCGG GGCGCGAGCG GAGCCTCCGC CCGCAACCGG GTCGCCGCCG AGGCGGCTTG GCGCGAGCGT CGGGGTCGGC CGGGAGCGGA GGAGACCGGC CGGTCCGGAA GGCCGAGTAG CCGTCCCGAC CACGGCAGAC CGGGGCGCGA CTCCTCGGTA TCCCATCGGC CCGGGCAGGC CCGGGCCGGC AGCGACGGCC CGCGGCCCCG GCACGACGGC CCTGAACGGC CGACTCACGG CAGAGTCTGG CGTTCCGATG GCGACCGTCC CGCGGGTACG CGCTCGGCCG GCCCGCGGCC CGGCGGCGAT CGAGGCCGGG AGTCCCGGGG GCCCCGGGAC ACCAGCGGTG GAGGGGACCG CCGCGACGGC GCCGCTCGCG CCGAGCGCCG TGGCCGGCCG TTCACCGAGG CTTCCAGGCC CGGGGGCGGC GGCCCCCGCG GCGGCCCCCG CGGCGGCCGT CCGACCGGGC CTGGCCGGAC TGACAGAACC GACCGGGCTG GCCGGACTGA TCAGACTGAG CAGGGCAGCC GGCGGGCCCG GGTGCCGGCT CCGCCACTTC CCGACGAGGC CCGCGCGGAC CTGCTGGACC ACGACGTGCG CCGGTCCCTT CGGGGGCTGC CATCGTCGCT CGCCGACACG ATCGCCCGCC ATCTCGTCGC GACCGCCCTG CTGCTCGACG ACGATCCCGC CCGCGCGCTC GCCCACGCCC GCGCCGCCGC CGATCGGGTG CCGCGCCTGC CTGCGGTGCG CGAGGCGGTC GGTATCGCGG CCTACCATGC GGGGGAGTAC GCGACGGCCC TGGTGGAACT TCGGGCCGCT CGTCGGATGG ACGGTTCCGC GCACAACCTG CCGCTGATGG CGGACAGCGA ACGGGGACTG GGCCGGCCGG AGCGTACCGT CGCCTACCTG CGGGATCCGC AGATCGACCA GCTTGATCCG GCCGCTCGGG CGGAGATGCT CATCGTCGTC TCCGGGGCCC GCCGGGACCT CGGTCAGCCG GAGGCCGCCG TCGTGTTGCT GCGGGATCTG GCCACGGCCA AGACGCCGCC CGCGCCGTGG ACCGCCCGCC TCTGGTACGC CTATGCCGAG GCGCTGCTTG CCGCCGGTCG TCCAGAGGAG GCCGCACGCT GGTTCACCTC CACGGCTGCG ATCGACGAGG GAGAGACCGA CGCCGACGCC CGTGCGTATC TGATCATGAC TGGTCGGCCT CTCCCCGAGG AGGACGAGGA GGCTGCCCAG GACGGCGCGG ATCTCCTGCT CTCGGATCGG GCCGATCCCG ACGCGGACGC CGGGACCGAG GCGAACGTCG ATCAGGACAT CACCGGCCAT GATCTTACTG ATCATGGCAC CGGCACCGGC ACCGAGGCTG CTCCCGAGGC CGAGGCGACG GAGACCGGGA GGTAG
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Protein sequence | MPREDRSSQR GGTTPFTSPH PQRRDRDASG DRGTPAEGRR AGRPVRGDAP GVRRGGGSET GASRGQGGPS QGARQGARGG GQGGARGGTR GGAGQFRRGP EGQGRPDRSR GSDSNTRYGN ARYGASPRAG DAGSATSSSS SAASFVDRRP GGARRPEGTG TGGGRAPAAG GERFSRAGGP RGDRGASGDR GASGASARNR VAAEAAWRER RGRPGAEETG RSGRPSSRPD HGRPGRDSSV SHRPGQARAG SDGPRPRHDG PERPTHGRVW RSDGDRPAGT RSAGPRPGGD RGRESRGPRD TSGGGDRRDG AARAERRGRP FTEASRPGGG GPRGGPRGGR PTGPGRTDRT DRAGRTDQTE QGSRRARVPA PPLPDEARAD LLDHDVRRSL RGLPSSLADT IARHLVATAL LLDDDPARAL AHARAAADRV PRLPAVREAV GIAAYHAGEY ATALVELRAA RRMDGSAHNL PLMADSERGL GRPERTVAYL RDPQIDQLDP AARAEMLIVV SGARRDLGQP EAAVVLLRDL ATAKTPPAPW TARLWYAYAE ALLAAGRPEE AARWFTSTAA IDEGETDADA RAYLIMTGRP LPEEDEEAAQ DGADLLLSDR ADPDADAGTE ANVDQDITGH DLTDHGTGTG TEAAPEAEAT ETGR
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