| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3153 |
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| Symbol | |
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| ID | 3903950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3731294 |
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| End bp | 3732625 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637880474 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_482239 |
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| Protein GI | 86741839 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.408525 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGTCA CCGACGGCGA CCGGGTATTC CGGCTGCGCC CCCCCGCGGC CTCGGCATCC
GGCGTCGGCG GGTCCTCGGA TCATCGTCCG TCGGCACCTC GGCCCGGCCC GGACGACCTG
GCTGGGCCGG ACGACCTGGC TGGGCCGGAC GACCTGGCTG GCCCGGACGA CCTGGCTGGC
CCGGACGACC TGGCTGGCCC GGACGACCCG CCCCGGCCTG CGGATCATCG AGCCGGGTCC
CAGCTGTCCC AGCTGCGTGG CACGCCTGCC GGCGTCATCG AGCGCTATCT CCACCATCTG
GAGGGCGAAC GCGGACTCGC GCGCAACTCG GTACTCGCCT ACCGTCGCGA CCTGCGCCGC
TATTGTGATC ATCTCTCCGC ATGCGGTCTG CCCTCGTTGG ACGCGGTCGG TGAGGCGGAG
GTTGCCGGAT TCGCCGCCGT GCTGCGCACC GGTGACGACA CGCACCCGCC GCTTGCCGCG
GCGTCGGTCG CGAGGATGCT GGTCGCCGTC CGGTCGCTGC ACCGCTTCGC GGCCGACGAG
GGTGACGTCC CCGAGGACGT GTCCCGGCCG GTTCGACCGC CGACGCCTCC CCGGCGGCTA
CCGAAGGCCC TGAGCATCGA CCAGGTGGTG GCCGTCCTCG CCGCGGCCGC GGGTGCGCCC
CCGCCGGGAT CCCCGCCGCC GTCCGGGAGA CCGCAGCCGT CCGGGAGACC GCAGCCGGTG
GAACCGGCCG AGGCCGTCCG TCGTCTGCGA GCGACCGCGT TGCTGGAGCT TCTCTACGGC
ACCGGGGCCC GGATCTCGGA GGCCGTCGGT CTCGACGTCG ACGATCTCGA TCTGGAGGCC
GCCTCCGTGC GCCTGCATGG CAAGGGCGGA CGTGACCGGA TCGTCCCGCT CGGTCGGTAC
GCCATCGCCG CGGTGGCCGA CTACCTGCGG GTGGGGCGGC CGACGCTGGT CGCCCCCCGC
TCGGGGCCCG CGGTCTTCCT GTCCCGCCGC GGTAATCGCC TGTCCCGGCA GAGCGCGTGG
TCGGTGCTGC GTACGGCGGC GCTCGCGGCC GGTGTGGAGG GGGTCTCACC CCATGTGCTG
CGCCATTCCT TCGCCACCCA CCTGCTCGAC GGCGGCGCCG ACGTCCGGGT GGTGCAGGAG
CTGCTGGGAC ACGCCTCGGT CAGTACCACC CAGATCTACA CCCTGGTGAC GGTGGACCGG
CTTCGCGAGG TGTACGCGGC CTCGCATCCA CGCGCCTTGG GCGCGGCCCT GGGCTCGATC
GGTCACCACT CCCGGACCTG GGGCCCGCGG ACGGACCGGT GCGTGACGGG CCCGTGCATG
ACGGACCCGT GA
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| Protein sequence | MGVTDGDRVF RLRPPAASAS GVGGSSDHRP SAPRPGPDDL AGPDDLAGPD DLAGPDDLAG
PDDLAGPDDP PRPADHRAGS QLSQLRGTPA GVIERYLHHL EGERGLARNS VLAYRRDLRR
YCDHLSACGL PSLDAVGEAE VAGFAAVLRT GDDTHPPLAA ASVARMLVAV RSLHRFAADE
GDVPEDVSRP VRPPTPPRRL PKALSIDQVV AVLAAAAGAP PPGSPPPSGR PQPSGRPQPV
EPAEAVRRLR ATALLELLYG TGARISEAVG LDVDDLDLEA ASVRLHGKGG RDRIVPLGRY
AIAAVADYLR VGRPTLVAPR SGPAVFLSRR GNRLSRQSAW SVLRTAALAA GVEGVSPHVL
RHSFATHLLD GGADVRVVQE LLGHASVSTT QIYTLVTVDR LREVYAASHP RALGAALGSI
GHHSRTWGPR TDRCVTGPCM TDP
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