| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_3023 |
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| Symbol | |
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| ID | 3904376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3589046 |
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| End bp | 3589804 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637880343 |
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| Product | phosphoribosyl isomerase A |
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| Protein accession | YP_482109 |
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| Protein GI | 86741709 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
[TIGR01919] 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase/N-(5'phosphoribosyl)anthranilate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.139685 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGCTTA CTCTGCTGCC CGCCGTGGAC GTGGCCGACG GCAGGGCCGT CCGACTCGTC
CAGGGCGAGG CCGGTTCCGA GACCTCGTAC GGCGACCCGC GGGAGGCGGC GCTGACCTGG
CAGCGCGACG GCGCCGAGTG GATCCACCTG GTCGATCTCG ACGCTGCCTT CGGCCGGGGG
TCGAATCGGG AGCTCATCGC CGAGGTGGTA CGCGCGGTGG ACGTGGCCGT CGAGCTCTCC
GGCGGCATCC GCGACGACGC ATCGCTCGAC GCGGCGCTGG CCACCGGCGC GGCCCGGGTC
AACATCGGCA CGGCTGCGCT CGAGGATCCC GACTGGGTCC GCCGGGCCAT CGACCGGGTC
GGTGACCGTA TCGCGGTCGG TCTCGACGTC CGGGGGACCA CGCTGTCGGC CCGGGGCTGG
ACGCGGGACG GTGGCGAGCT GTTCGATGTG CTCGCCCGCC TCGACGCCGA CGGCTGCGCC
CGGTACGTGG TGACGGATGT GCGCCGAGAC GGCACGCTCA CCGGGCCGAA CGTCGAGCTC
CTGCGCTCCG TGACCGCGGC CACCAGCCGG CCGGTGGTCG CCAGCGGCGG CGTGGCCACG
CTCGACGACC TCACCGCGAT CGCCGTGGTG CCCGGAGTGG AGGGCGCGAT CATCGGCAAG
GCGCTCTACG CCGGCGCCTT CACGCTGCCC GAGGCCCTGG CCGTTGCCGG GAATATCGGG
AATATCGGAA ACGGATGTGC GGGTGCGGTG GGTCGATGA
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| Protein sequence | MTLTLLPAVD VADGRAVRLV QGEAGSETSY GDPREAALTW QRDGAEWIHL VDLDAAFGRG
SNRELIAEVV RAVDVAVELS GGIRDDASLD AALATGAARV NIGTAALEDP DWVRRAIDRV
GDRIAVGLDV RGTTLSARGW TRDGGELFDV LARLDADGCA RYVVTDVRRD GTLTGPNVEL
LRSVTAATSR PVVASGGVAT LDDLTAIAVV PGVEGAIIGK ALYAGAFTLP EALAVAGNIG
NIGNGCAGAV GR
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