Gene Francci3_2936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2936 
Symbol 
ID3903751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3466036 
End bp3466989 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content71% 
IMG OID637880257 
Productalpha/beta hydrolase fold 
Protein accessionYP_482023 
Protein GI86741623 
COG category[R] General function prediction only 
COG ID[COG4757] Predicted alpha/beta hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0681221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCAG ATGCTCTTGT TCCTCCCCCG TCGGCGGCCG CCGGTGAGAC CGAACCCGCG 
GCGGAAAGCG AGACGGAACT CGAGGTCGCC ACCACTGCCG GGACGCGATT CGGCCTGCGT
GTTCTTCCGC AGGCCGACGA GTCCGCGCCG GTGATTCTCC TGCTTCCGGC GATGGGGGTT
CGGACAAAGT ACTACACCCC CTTCGCCGAG GCACTGCGGT CGCTGGGGTA CTCGGTCGTG
ACAACCGATC TGCGCTGGCA TCACCACGGA GCCGCGGCGC TCCGGCGCTC GGCCGGCAGC
CGGGGCAGCT ACCAGGAGGG TGTCGAGGAC GACCTGCCGA CGATCACGGC GGCGACGCGG
GAACGATTCC CCGGGGCGCC GCTGTTCGTC GTGGGTCACA GTCTCGGCGG ACAACTCTCG
ATCCTGCGTG CCGCGCGGGA GGCCCCCGAC AGCGGCGGGC TGAGCGGCCT GGCCGTCATC
GGCGCGGGCA CCTCGTACTG GCGCGTCTTC AGGCCCCTTC GTTCAGCGTG GGTCCTGGGC
GGTTCCACGT TCGTCGCGGG GGTGTCGCAG CTGCTGGGCT ACTGGCCCGG GCACCGGTTC
GGCTTCGGCG GGCGGCAGCC CAGGGCGCTG ATGCTGGACT GGGCCAGAAG TGCCCGCACC
GGCCGTTACC GGCTGGCCAG GTCGGAGCCC GACCTCCTCG GTCTTCTCGG CGCGGTGACC
CTGCCGGTAC TGGCCATCTC CCTGGACGCC GACCATCTCG CGCCGCGCCG GGCGGTCGAC
TATTTCACCA GGCGGTTGAC GGGCTCGGAG GTCCATCGCG TCCACCTGGA CCGCACGAGT
GGATCCACCC ACCTCGGTCA CTTCGACTGG ATGAAGGAAC CCGCTGTCAT AGCACGCCAC
GTGGCCGAGT GGATCGACCT CGTCCTCGGC CGGAGCGGCA CGGGCGCCCG GTGA
 
Protein sequence
MSADALVPPP SAAAGETEPA AESETELEVA TTAGTRFGLR VLPQADESAP VILLLPAMGV 
RTKYYTPFAE ALRSLGYSVV TTDLRWHHHG AAALRRSAGS RGSYQEGVED DLPTITAATR
ERFPGAPLFV VGHSLGGQLS ILRAAREAPD SGGLSGLAVI GAGTSYWRVF RPLRSAWVLG
GSTFVAGVSQ LLGYWPGHRF GFGGRQPRAL MLDWARSART GRYRLARSEP DLLGLLGAVT
LPVLAISLDA DHLAPRRAVD YFTRRLTGSE VHRVHLDRTS GSTHLGHFDW MKEPAVIARH
VAEWIDLVLG RSGTGAR