Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2936 |
Symbol | |
ID | 3903751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3466036 |
End bp | 3466989 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637880257 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_482023 |
Protein GI | 86741623 |
COG category | [R] General function prediction only |
COG ID | [COG4757] Predicted alpha/beta hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0681221 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCGCAG ATGCTCTTGT TCCTCCCCCG TCGGCGGCCG CCGGTGAGAC CGAACCCGCG GCGGAAAGCG AGACGGAACT CGAGGTCGCC ACCACTGCCG GGACGCGATT CGGCCTGCGT GTTCTTCCGC AGGCCGACGA GTCCGCGCCG GTGATTCTCC TGCTTCCGGC GATGGGGGTT CGGACAAAGT ACTACACCCC CTTCGCCGAG GCACTGCGGT CGCTGGGGTA CTCGGTCGTG ACAACCGATC TGCGCTGGCA TCACCACGGA GCCGCGGCGC TCCGGCGCTC GGCCGGCAGC CGGGGCAGCT ACCAGGAGGG TGTCGAGGAC GACCTGCCGA CGATCACGGC GGCGACGCGG GAACGATTCC CCGGGGCGCC GCTGTTCGTC GTGGGTCACA GTCTCGGCGG ACAACTCTCG ATCCTGCGTG CCGCGCGGGA GGCCCCCGAC AGCGGCGGGC TGAGCGGCCT GGCCGTCATC GGCGCGGGCA CCTCGTACTG GCGCGTCTTC AGGCCCCTTC GTTCAGCGTG GGTCCTGGGC GGTTCCACGT TCGTCGCGGG GGTGTCGCAG CTGCTGGGCT ACTGGCCCGG GCACCGGTTC GGCTTCGGCG GGCGGCAGCC CAGGGCGCTG ATGCTGGACT GGGCCAGAAG TGCCCGCACC GGCCGTTACC GGCTGGCCAG GTCGGAGCCC GACCTCCTCG GTCTTCTCGG CGCGGTGACC CTGCCGGTAC TGGCCATCTC CCTGGACGCC GACCATCTCG CGCCGCGCCG GGCGGTCGAC TATTTCACCA GGCGGTTGAC GGGCTCGGAG GTCCATCGCG TCCACCTGGA CCGCACGAGT GGATCCACCC ACCTCGGTCA CTTCGACTGG ATGAAGGAAC CCGCTGTCAT AGCACGCCAC GTGGCCGAGT GGATCGACCT CGTCCTCGGC CGGAGCGGCA CGGGCGCCCG GTGA
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Protein sequence | MSADALVPPP SAAAGETEPA AESETELEVA TTAGTRFGLR VLPQADESAP VILLLPAMGV RTKYYTPFAE ALRSLGYSVV TTDLRWHHHG AAALRRSAGS RGSYQEGVED DLPTITAATR ERFPGAPLFV VGHSLGGQLS ILRAAREAPD SGGLSGLAVI GAGTSYWRVF RPLRSAWVLG GSTFVAGVSQ LLGYWPGHRF GFGGRQPRAL MLDWARSART GRYRLARSEP DLLGLLGAVT LPVLAISLDA DHLAPRRAVD YFTRRLTGSE VHRVHLDRTS GSTHLGHFDW MKEPAVIARH VAEWIDLVLG RSGTGAR
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