| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2909 |
|---|
| Symbol | |
|---|
| ID | 3903973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | - |
|---|
| Start bp | 3423987 |
|---|
| End bp | 3426194 |
|---|
| Gene Length | 2208 bp |
|---|
| Protein Length | 735 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637880230 |
|---|
| Product | peptidase S9, prolyl oligopeptidase active site region |
|---|
| Protein accession | YP_481996 |
|---|
| Protein GI | 86741596 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.390736 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGAC CCGCGGTGGT GGCGCAGCCG GTGGTGGGAC GGCCGGTGGT GGGACGGCCG
GTGGTGGCGC ACACCGTCGA CTCCGGGCGT CCCGGCGATC TGTCCGACGC CTGGGTCGCG
GCGGCGAGCT GTCGCGCACC GAGTACCGGC CCGCATGGTC GGCTCGCCTT CGTCGGCGAT
CGCGGCGGCG CCCCCGCGCT GTGGATCCGG GACCCGGATG GCCGGGAGCG CCCGGTTGAC
ACCGGCCCCG GTCATGTCCG GGCGGTCCTG TGGTCGCCGA CCGACGACCG GATCGCCGTC
CACGTCGCGC CGGGCGGCGG GGAGCTCACC GAGGTCCGGA CCGTCCGGGC GGACGGCGGT
GACCTGCGCC ACCTGGCCGG CGGCGGGAGG CGGGCCGCCA CCCCAGCCCG CTGGACCGAC
GACGGCCACG GCCTCGTCGT GACCGAGTCC GACCGCTCCG ATCCGTCCGG CCGCACCGCC
GCGGTGCTGA TCGACTCCGA CGGGCGACGG ACCCGCCTCG CCGCCGGAGT GGCGCTGCAG
GTGTGCGACG TCGTCGTTCT CCCCGACCCC GCGCCGGACG GGACGGGGAG CGGCGGTCCG
GGGCGGGGCC CGGCCGGTGG CGGGTACCGC CTGCTGCTGC GGGAGGGCCC CCGTGGCGTC
CGGCGGGTGC TCGTGGTCGA CACCATGATC GCAGCCAGGG AGGGGATCGC AGCCAGGGAG
GGGATCGCAG CCAGGGAGGG GATCGCAGCC AGGGAGGGGA TCGCAGCCAG GGAGGGGATC
GCAGCCAGGG AGGGGATCGG CGGGTCATGG CAGGTGCCCG GCGGGACGGC GACCACCGTG
ACCGGTCGGT TCGTCGCCGA CGGCCGTCGC CTGCTGCTGC TGTGCGACAT CGGGCGGGAC
CGGGCCGCGT TGTTCGACGT CCCCGTCGAC CCCACGGGCG ATCCGACCGG CGGGCCGCGG
GTCCTCGCCG CCCGGGATGA CGCCGATCTG GAGCGGTTCG CCCTGCTCGA TCCGGATCGG
GCGGTCGTCG TCTGGAACGT GGGCGGGCGC AGCGAGCTCG CGCTGGTCGA TCTGCCCACC
GGACGGTCAC TGACGCTGCC GCCGCTTCCC CGCGACGTCG TCACCGGCGT GCTCGTCCGG
CCCGGGGGGC GGGAGCTCGT GCTTGCCCTG GATGGTGCCA CCAGGCCGGG GGAGATCTGG
ACCTGGGATC TCACCGCGCC ATCCGCCGGC TACCGTCGGC TGATCTCGCA CGCTCCCGTC
GAGGCAGTGA CCATCCCGGG ACCGCGGGTC GTCCTGAACA TCGACGTTGA CGGCCTGGGA
TCCGACAGCC CGGGGCCATC CGGGCCATCC GGGCCATCCA TGCCATCCGG GCTATCCGCG
CCGGCGCGTG TACCCGGGAT CCCCGGGCCC CGCACCGGTG ACCACCCGCG GCTGGTCCGT
CCGGTGCCGT GCGCCCTGCC GGCCCACGAC GGCCGGGAAC TGTCCGGTTG GTGGTACCGC
CCGCACGGCC CGCGAGGACC GGTCCCGACC CTGCTCCACC TGCACGGCGG CCCGGAGGCG
CAGGAGCGTC CCGTCTACAA CCCGCTGTTC CAGGCCGTGC TCGCCCGGGG GATCGCGGTG
TTCGCGCCGA ACGTGCGCGG CTCCACCGGA TTCGGCCGGT CGTTCGAGGA GGCCGATCAC
ACCCATCGTC GGTTCGGCGG CATCGCCGAC GTCCGCAGCT GCGTGGCGCA TCTGGTCGCG
ACGGGCCTGG CTGACCCGGA CCGGATCGGC GTCGCCGGCC GCTCCTACGG CGGCTATCTG
ACGCTGGCGG CGATGGTCCA CTTCCCGGAG CTGTTCCGGG TCGGGGTAGA CGTCTGCGGG
ATGGTTGATC TGGAGAGCTT CTATCAGTAC ACCGAGCCGT GGATCGCCGC GTCCGCGGTC
ACCAAGTACG GTGATCCACG CACCGAGCCG GCGTTGCTGC GGGCGCTGTC CCCGCTGCAC
CGGATGAGCG CCCTCGCCGC GCCGTTGCTC GTCGTGCATG GGGAGAACGA CACCAACGTC
CCGGTGATCG AGGCGGAGCA GACGGTCGCC GCGGCCCTCG CTCGCGGCGT CGACTGCCGT
TACCTGCTCT TTCCCGGCGA GGGGCACGAG ATCGCGGATC TGCGCCACCG CAGGTCGTTC
GTCCGAGCGG TCGTCGACTG GCTGACCCCC CGGCTGCTGA CCCCCTGA
|
|---|
| Protein sequence | MIRPAVVAQP VVGRPVVGRP VVAHTVDSGR PGDLSDAWVA AASCRAPSTG PHGRLAFVGD
RGGAPALWIR DPDGRERPVD TGPGHVRAVL WSPTDDRIAV HVAPGGGELT EVRTVRADGG
DLRHLAGGGR RAATPARWTD DGHGLVVTES DRSDPSGRTA AVLIDSDGRR TRLAAGVALQ
VCDVVVLPDP APDGTGSGGP GRGPAGGGYR LLLREGPRGV RRVLVVDTMI AAREGIAARE
GIAAREGIAA REGIAAREGI AAREGIGGSW QVPGGTATTV TGRFVADGRR LLLLCDIGRD
RAALFDVPVD PTGDPTGGPR VLAARDDADL ERFALLDPDR AVVVWNVGGR SELALVDLPT
GRSLTLPPLP RDVVTGVLVR PGGRELVLAL DGATRPGEIW TWDLTAPSAG YRRLISHAPV
EAVTIPGPRV VLNIDVDGLG SDSPGPSGPS GPSMPSGLSA PARVPGIPGP RTGDHPRLVR
PVPCALPAHD GRELSGWWYR PHGPRGPVPT LLHLHGGPEA QERPVYNPLF QAVLARGIAV
FAPNVRGSTG FGRSFEEADH THRRFGGIAD VRSCVAHLVA TGLADPDRIG VAGRSYGGYL
TLAAMVHFPE LFRVGVDVCG MVDLESFYQY TEPWIAASAV TKYGDPRTEP ALLRALSPLH
RMSALAAPLL VVHGENDTNV PVIEAEQTVA AALARGVDCR YLLFPGEGHE IADLRHRRSF
VRAVVDWLTP RLLTP
|
|---|
| |