Gene Francci3_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2887 
Symbol 
ID3906018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3402796 
End bp3403545 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content72% 
IMG OID637880208 
Producthypothetical protein 
Protein accessionYP_481974 
Protein GI86741574 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00393929 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.424597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAGC TGGCCGCGCG TTACTGCGAG TGCGGCACCC GGCTGGCCGC CGACAACGCC 
GGCCCCCGCT GCACCGGATG CCTGGGGCGA GTCCGCCGGG AAGCCGAAGG CCCGCCGGCG
CTTCCGGATC ACTTCTGGCA GACCGATCAA CTCCGCGACG CCTTCGCGGC CCAGCACATC
GGCCTGATCT CCGTGGCCTA CCGCCAAAGC CCGTACCACC GCCGGCCCAT CAGCCAGGAG
CGGCTTGGTG GGTGGCTCAA TTTGACCCAG GCCCAGGTGA GCCGGATCGA GAGTGGCCCG
CCCATCCGGG ACTTGGACCG CCTGACGCAC TGGGCCAGGA CACTTCGGCT GCCGCCTGCC
CTGCTTTGGT TCGACCTTCC CGGGCAACCG CGGGTACCCC TGGCGGCGTC TTCCACGCCG
GCCTGGATGG GTGGACCGGG TTACGGCTCC ATCGCTGCCA CCGTCGAGGG TGGAGCCCTG
GAGACGATCC GCGCCGCCGC CCTGGCCTTC CGGGCTGCCG ACCGCCAGCT CGGGGGCGGG
CGGCTGTACC CAGTGGTAGT GCGGTTCATC CAGACCGAAG TTGCTCCGCA GCTGGTGGGC
CACCAGCACC CGCCGTCGGC GGTATTTTCG GCGGCCTCGT CGCTGACGGA CATGGCCGGC
TGGCCTACGA CGACGAGCGG GGCGACCTCG CGGGGCAGCA CTTCGTGCAG GCCTTCGGCC
TTGCCACCGC CGCCGGCGAC CAAGCCCTGA
 
Protein sequence
MPELAARYCE CGTRLAADNA GPRCTGCLGR VRREAEGPPA LPDHFWQTDQ LRDAFAAQHI 
GLISVAYRQS PYHRRPISQE RLGGWLNLTQ AQVSRIESGP PIRDLDRLTH WARTLRLPPA
LLWFDLPGQP RVPLAASSTP AWMGGPGYGS IAATVEGGAL ETIRAAALAF RAADRQLGGG
RLYPVVVRFI QTEVAPQLVG HQHPPSAVFS AASSLTDMAG WPTTTSGATS RGSTSCRPSA
LPPPPATKP