Gene Francci3_2794 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2794 
Symbol 
ID3904940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3288595 
End bp3289392 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content74% 
IMG OID637880115 
Productcopper resistance protein CopC 
Protein accessionYP_481881 
Protein GI86741481 
COG category[R] General function prediction only 
COG ID[COG2372] Uncharacterized protein, homolog of Cu resistance protein CopC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACCAG AGGCGAGGCC GACTGAGAGA CGGCGCACGG CAGTCCCGGG GAGGGGCGGC 
ACCCGGTTCG CCGACCTCAC CGGTGCCGCC CACGCCACCG GTGGTACGGG CGGCACGGGG
CCCACCAGCC TTGCCGCTGC GATCAGCCTG GTTGTGACGC TTGGCCTCGC AGCGGCGCTC
GTCCCGGCGC TCCTGCTCGG ACTGGCCACC CCCGCATCGG CGCATTCACG TCTGGTCACC
ACCACCCCGG TGGCGGACAG CACTCTCACC GCCCCGCCAC ATGAGATCAT CCTGACATTC
AACGAGCCGG TGTCCCCGCG CTACACGAAC GTCGCCGTCA CGGCGGCCGA CGGCGCCGGC
GTGACCGCCG GTGCCACCCG CGTCGAGGGC GGCACCGTCC ACCAGGGCCT CACCGCTCTC
CGCGACGGTC GCTACACGGT GGCCTATCGG GTCGTGTCCG AGGACGGTCA TCCGGTCGGC
GGCGAGTTCG CCTTCACCGT TGCCGGCAGC ACGGCGTCCG CGGGCCAGGA GGGATCCCCG
CCCCCGTCTC CGGTCACCAC GACGCCGACC CCGGCAGCCA CCGCGAGTCC GACCACGGGT
GCCGCGCCGG CCCCGTCCGC GGCCGTCACG GCCGTCACGG CCGTCACGGC CGATACGGGA
CCCGCGGACG GCGGGGGCGG GAGCAGTGGC GGTGGCGGTG GCGGTGGCTG GATACTCCCT
GTCGTGATCG CCGGTATCCT CACGCTCGGT GGCGGTACCT TGTTCGCCCT GCGGCGACGT
CACTCCGGAG CGCGCTGA
 
Protein sequence
MRPEARPTER RRTAVPGRGG TRFADLTGAA HATGGTGGTG PTSLAAAISL VVTLGLAAAL 
VPALLLGLAT PASAHSRLVT TTPVADSTLT APPHEIILTF NEPVSPRYTN VAVTAADGAG
VTAGATRVEG GTVHQGLTAL RDGRYTVAYR VVSEDGHPVG GEFAFTVAGS TASAGQEGSP
PPSPVTTTPT PAATASPTTG AAPAPSAAVT AVTAVTADTG PADGGGGSSG GGGGGGWILP
VVIAGILTLG GGTLFALRRR HSGAR