Gene Francci3_2760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2760 
Symbol 
ID3906471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp3252904 
End bp3253923 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content74% 
IMG OID637880083 
Producthypothetical protein 
Protein accessionYP_481849 
Protein GI86741449 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGACA CCACGGCACA GCCGGACAGC GCGGCACAGC CGAACAGCGC GGCACAGCCG 
AACAGCGCGG GGTACGCGCG CCCCGCCGGG CCGGCGGACG CCCGCAACCC CGCCGGGCAG
GCCGTCGAGG TGGCGGACGC GGAGTCCGCC GCCGGTGGGA TCGTCGTCGG GGTCGACGGT
TCACCCGCGT CCGTCGCCGC GATCCGGTGG GCCTGTGACG AGGCCGCCCG GCGCCTGGTC
CCGGTGATCG CGGTACTGGT ATGGGACGTC ATGGGCGAAC CGCGGCCGGT CTTCGAGACC
GCGGCGAACG CCGACCGCGA GGGTCTGGCG CACGCCGCCA CGCGGGTTCT GGACACCGCG
CTGACCGCCG CCCGGGTCAG CGATCCGACA GTGCGGATCA TCCGGCGGGT CGAGGAGGGC
AGTCCCGTCC CGGAGCTGCT GCGGGCCGCG GTCGGCGCGC GGATGATCGT CGTCGGCGAG
CGCGGTCACG GGGCCCTGCA CCGGCTGGTG AGCGGCTCGG TGAGCCAGGG TGTGGTGCAC
TATGCCTCCC TGCCGGTCGT CGTGGTACGG CCGGTCGCCC CGGCCGCCGG CGTCGACGAC
CGGCCGGTGG TCGTCGGCGT GGACGGCTCG GCCCTCTCGC TCACGGCACT ACGGTGGGCC
GTCGAGGCGG CGATGCTCCG CAAGAGCGCC CTGCACGTCG TGCATGCCTG GCACCTGGAC
ATCCCGATCT ACCCGGGGAG CTACGCCGAT ATCGGATCGG TGCTGGCGGA GCAGGCCCAG
CAGACCCTCG ACCAGGCCGT CTCCACGATC GTCACCGAGC ACGCCGGCGG GCTACCCATC
CCCGTTATGA AGGAGACCGT CGCCGATGGC CCCGCCCATG CGCTGCTGCG GGCCTCGGCT
GACGCGCAGC TGCTCGTGGT CGGCAGCCGC GGGCACGGCG GCTTCGCCGA ACTGCTTCTC
GGTTCGGTGA GCCACCAGTG CGTCCTGCAC GCGCACTGCC CGGTGGCCGT GGTCAGGTAG
 
Protein sequence
MSDTTAQPDS AAQPNSAAQP NSAGYARPAG PADARNPAGQ AVEVADAESA AGGIVVGVDG 
SPASVAAIRW ACDEAARRLV PVIAVLVWDV MGEPRPVFET AANADREGLA HAATRVLDTA
LTAARVSDPT VRIIRRVEEG SPVPELLRAA VGARMIVVGE RGHGALHRLV SGSVSQGVVH
YASLPVVVVR PVAPAAGVDD RPVVVGVDGS ALSLTALRWA VEAAMLRKSA LHVVHAWHLD
IPIYPGSYAD IGSVLAEQAQ QTLDQAVSTI VTEHAGGLPI PVMKETVADG PAHALLRASA
DAQLLVVGSR GHGGFAELLL GSVSHQCVLH AHCPVAVVR