Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2760 |
Symbol | |
ID | 3906471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 3252904 |
End bp | 3253923 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637880083 |
Product | hypothetical protein |
Protein accession | YP_481849 |
Protein GI | 86741449 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGGACA CCACGGCACA GCCGGACAGC GCGGCACAGC CGAACAGCGC GGCACAGCCG AACAGCGCGG GGTACGCGCG CCCCGCCGGG CCGGCGGACG CCCGCAACCC CGCCGGGCAG GCCGTCGAGG TGGCGGACGC GGAGTCCGCC GCCGGTGGGA TCGTCGTCGG GGTCGACGGT TCACCCGCGT CCGTCGCCGC GATCCGGTGG GCCTGTGACG AGGCCGCCCG GCGCCTGGTC CCGGTGATCG CGGTACTGGT ATGGGACGTC ATGGGCGAAC CGCGGCCGGT CTTCGAGACC GCGGCGAACG CCGACCGCGA GGGTCTGGCG CACGCCGCCA CGCGGGTTCT GGACACCGCG CTGACCGCCG CCCGGGTCAG CGATCCGACA GTGCGGATCA TCCGGCGGGT CGAGGAGGGC AGTCCCGTCC CGGAGCTGCT GCGGGCCGCG GTCGGCGCGC GGATGATCGT CGTCGGCGAG CGCGGTCACG GGGCCCTGCA CCGGCTGGTG AGCGGCTCGG TGAGCCAGGG TGTGGTGCAC TATGCCTCCC TGCCGGTCGT CGTGGTACGG CCGGTCGCCC CGGCCGCCGG CGTCGACGAC CGGCCGGTGG TCGTCGGCGT GGACGGCTCG GCCCTCTCGC TCACGGCACT ACGGTGGGCC GTCGAGGCGG CGATGCTCCG CAAGAGCGCC CTGCACGTCG TGCATGCCTG GCACCTGGAC ATCCCGATCT ACCCGGGGAG CTACGCCGAT ATCGGATCGG TGCTGGCGGA GCAGGCCCAG CAGACCCTCG ACCAGGCCGT CTCCACGATC GTCACCGAGC ACGCCGGCGG GCTACCCATC CCCGTTATGA AGGAGACCGT CGCCGATGGC CCCGCCCATG CGCTGCTGCG GGCCTCGGCT GACGCGCAGC TGCTCGTGGT CGGCAGCCGC GGGCACGGCG GCTTCGCCGA ACTGCTTCTC GGTTCGGTGA GCCACCAGTG CGTCCTGCAC GCGCACTGCC CGGTGGCCGT GGTCAGGTAG
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Protein sequence | MSDTTAQPDS AAQPNSAAQP NSAGYARPAG PADARNPAGQ AVEVADAESA AGGIVVGVDG SPASVAAIRW ACDEAARRLV PVIAVLVWDV MGEPRPVFET AANADREGLA HAATRVLDTA LTAARVSDPT VRIIRRVEEG SPVPELLRAA VGARMIVVGE RGHGALHRLV SGSVSQGVVH YASLPVVVVR PVAPAAGVDD RPVVVGVDGS ALSLTALRWA VEAAMLRKSA LHVVHAWHLD IPIYPGSYAD IGSVLAEQAQ QTLDQAVSTI VTEHAGGLPI PVMKETVADG PAHALLRASA DAQLLVVGSR GHGGFAELLL GSVSHQCVLH AHCPVAVVR
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