| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2729 |
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| Symbol | |
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| ID | 3904719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 3216956 |
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| End bp | 3220453 |
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| Gene Length | 3498 bp |
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| Protein Length | 1165 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 637880052 |
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| Product | helicase-like |
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| Protein accession | YP_481818 |
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| Protein GI | 86741418 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.36993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGTTA GGTCTGAGAT GGGGACCGAA GAGGGCCGGC ACGGTGCCAC CGGGCCGGGA
ATCGGTCGCC CGGCGTCCTG CCAGACTGGT CGGGCTGTTC ACCAAGGGGG GTATCAGGTG
CCGAGTTCGA CGACCGAACG TGCTCCGTCA GCACGCCGCG TCCGCCAGCA GGCCATGGGC
GGGACGGGGC CGGGCCCGGG GGCGCCGGCA TCTGACGAGC GTCCCGACAT CGGCGCGCTG
GTGGAGGTCC GTGGTCAGAA GTGGGTGGTC GCGGACATCG ACGGACCGGC CGCCGGCGGG
GCGAGGTGGA TCGCGGCGGA CGTGGGCGCG GCGGATAAGG CGGACGCGGC GGGGCCTGAC
GCCGTCGGGG ACGGAGCGGC GCCGAGCACG AGCACGTTGG TCACCCTCCA GAGTGTGGAG
GACGGTCGCT ACGGCCACAC CGTCGAGGTG ATCTGGGAGG TCGAGCCGGG CCGGCGGGTC
CTGCCCAGCG GTTCGCTGCC CGACGTCACC CGGGGCGGCT TCGACCCACC GGGCCGGCTG
GCCGCCTTCC TCGACGCGGT GCGCTGGTCG GCGGTGACCT CCGCGGACGC CCGGCGGCTG
CAGGCCCCGT TCCGCTCGGG GGTGGCCGTC GAGGACTACC AGCTCGAGCC GGTGGCGCGC
GCCCTTGCGG CGCCCCGGGT GAACCTCCTG CTCGCCGACG ATGTCGGCCT CGGTAAGACC
ATCGAGGCCG GGCTGGTCGC CGAGGAGCTG CTGCTGCGGC ACCGGGCGCG CCGCATCATG
ATCGTCTGTC CGGCCGGGCT CACCCTGAAA TGGCGCGACG AGATGGCCGA GAAGTTTGGC
CGCGATTTCA CGATTATTGA CGCGGAGCGC TGCGCGGCGG TCCGTCGCTC GCACGGCAGC
GCGGCGAACC CGTTCGAGGT CTACCCGCTG ACGATCGTCA GCCTGCCCTG GCTGCGTGGC
CCGAAGGCGC AGCGGCTGCT CGACGAGGTG CTGCCCGGCG ATGGTCAGCC GACCTACCCG
CGGACCTTCG ACCTGCTCAT TCTCGACGAG GCCCATCACA TCGCCCCGGC CGCGCCCAGG
CAGGTCTACG CCGTCGACTC CCAGCAGACC AAGCTGATCC GCCGGCTCGC GCCGCACTTC
ACCCACCGGC TGTTCCTGTC CGCCACCCCG CACAACGGCT ACCTCGCCTC GTTCACCGCG
CTGCTGGAGA TCCTCGACGA CCAGCGGTTC GCCCGTGGCG TCGAGCCGGA CCGGATGGCC
GTGGACGAGG TCGTGGTCCG CCGGTTGAAA AGCAGCATCG AGAACGCGGA CGGCACCCCG
CGGTTCCCCC GGCGCCGCTC GATCGACATG CCGGTGGTCT ATCCGGACGG CGAACGGGAG
ATCCACGGCC TGCTCAAGGA GTTTGCCGCA CTGCGCCGGG CCCGGCTGGA TTCGCCGCGC
GGCCGCAAGG CGACCGACCT GGTGACCCTG CTGTTGAAGA AGCGGTTGTT CTCCTCCCCG
GCGGCGTTCG GCCACACCGT GGGCGTCTAC CGGGAGACCC TCGTGTCCCG GCACGGGCGC
CCGGTCCACG CGTCCCGCCT CGCGGATGAG GCCGAGCCGG GGATGCCTGG GCCGGGGATG
CCCGAGCCGT GGATGGAGGA CTACTTCGAC GACGTCGCGA CCCTGGACGA CGAGCAGCTC
GCCGACGCCG AGGACGACGC CCTCGGCCGG ATCGGGCCGA TGCAGCTCGA TCCCACCGAC
GGCGAGATCG AGCTGCTGGA CCGGATGCGG CGCTGGGCGG ACGCCCACGA GGCCGAGCCG
GACGCCAAGG CCCGCGCGCT GCTCGATTAT CTGAACGCGG TGTGCCGGCC GGACGGGCGG
CACTGGTTCG ATGAGCGGGT CGTCGTGTTC ACCGAGTACC GCGACACGCA GATCTGGCTC
GCCGGACTGC TGCGCCAGGA GGGGCTCGCC GGGGAGCGGC TCGGCCTGTT GCACGGCGGG
CTGTCCGTTG ACGAGCGCGA GCAGCTGCGG CTCGCCTTCC AGGCCGAACC GAGCGAACAT
CCGATGCGGG TCCTGCTCGC CACCGATGCG GCGAGTGAGG GCATCGACCT GCAGAATCAC
TGCCATCGGC TGGTCAACTA CGACATCCCG TTCAACCCGA ACAAGCTGGA GCAGCGGATC
GGCCGCATCG ACCGGTACGG GCAGCGCCGT TCCCCGGAGA TCCGGCACTT CGTCGGCTCC
GGCTGGTCGG GCAGCGTCGA TTCCTTTGAG GCCGACCTGG AGTTCCTGTC GCGGGTGGTG
AAGAAGGTCG CGCAGATGAA GGCCGACCTC GGGTCGGTCA ACGCGGTGCT CTCCGATCGG
GTGCAGCGTC GGATGCTGGG GGAGCGGATC GACCTCGGTC CCGACGACCT CGACGTCGGT
CCGGGCGGCT CCGTGGCCGC CGGAGGCACC GTCCCGGTCG CGGAGAACGT GCGCGAGCAG
GTGCGCCGGC TGCGGGCGAA CCTCGACGAC ACGGTCCGCG AGCTCGGCAT CACCCCGGCG
GCGGTGCGCC GCGTCGTCGG CACGGCACTG AGCCTCGCCC GCCAACAGGC ACTCACCCCG
TACGTCGACG AGAAGGAGCA CGCCGAGGGA CTGTTCACGG TGCCGACGCT CACCGGCTCG
TGGCAGCGCG CCTCCGCGGG ACTCACCGAG AAGCTGCGCC GTGAGGACCT TCCCCCGGGC
ACGCCGCCGC GCCAGCGGCC GATCACCTTC GACTCGGCCA TGGCGAAGGA CCGCGACGAC
GTCGTGCTCG CGCACCTCGG CCACCGCCTC GTCGACATGT CGACAAGGCT GCTGCGGGGC
GCCGTCTCCA ACGCCGACGT CGGGCTGCAC CGCGTCACCG CCGTGCGCTC GGACGATCCG
CGCTGCGAGG AGGTGCTGAT CGGCGCGTTC TCCCGGTTCG TGCTGGTGGG CGCGGACGGC
GTCCGGCTGC ACGAGGAGGT CCTGTACGCG GGCGGCTGGG CGCCGGCGAC CGGGCGGTTC
CGCCGCCTGG AGAACCTGAC GGTCCTCGGC GATCTCGTCG GTACCGCGCT CGCCGCCGGC
CGGCCCGTCT CCGGGGAGAC GCGGGAGCGG CTCGCCGAGC GCTGGCCGGC GGTGCGGCCC
GGGGTGCTCT CCGCCCTGGA GTGGCGGACG AGGACCCGCC AGGAGTCGCT GACCCGCCTT
CTCGGCCAGC GCCGGGCCGC CGAGGAGAAT CGGATCACCA CTATCCTCGA TCAGTTCGCC
GCGACGCTGC GCGGTGCGAT CGAGGATCCG GAGAACGACG AGGACGCCCT GTTCAGCCGG
TTCGAGATCG CCAGGAGCCG CGAGGAGCTG GCCCAGTACC GCAAGGACCG GCAGGCGTGG
CAGGACCGGC TCGACCGGCT CGACCAGGAA CGGCGACGGG AGCTCGACGT GATCGCGCAG
CGATACCGTG ACCCGAGGCA GCACCAGTTC CCCGTCGCGG TCGTCCTGGT CGTGCCGGCA
GCGGAGGAGG CGCGATGA
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| Protein sequence | MSVRSEMGTE EGRHGATGPG IGRPASCQTG RAVHQGGYQV PSSTTERAPS ARRVRQQAMG
GTGPGPGAPA SDERPDIGAL VEVRGQKWVV ADIDGPAAGG ARWIAADVGA ADKADAAGPD
AVGDGAAPST STLVTLQSVE DGRYGHTVEV IWEVEPGRRV LPSGSLPDVT RGGFDPPGRL
AAFLDAVRWS AVTSADARRL QAPFRSGVAV EDYQLEPVAR ALAAPRVNLL LADDVGLGKT
IEAGLVAEEL LLRHRARRIM IVCPAGLTLK WRDEMAEKFG RDFTIIDAER CAAVRRSHGS
AANPFEVYPL TIVSLPWLRG PKAQRLLDEV LPGDGQPTYP RTFDLLILDE AHHIAPAAPR
QVYAVDSQQT KLIRRLAPHF THRLFLSATP HNGYLASFTA LLEILDDQRF ARGVEPDRMA
VDEVVVRRLK SSIENADGTP RFPRRRSIDM PVVYPDGERE IHGLLKEFAA LRRARLDSPR
GRKATDLVTL LLKKRLFSSP AAFGHTVGVY RETLVSRHGR PVHASRLADE AEPGMPGPGM
PEPWMEDYFD DVATLDDEQL ADAEDDALGR IGPMQLDPTD GEIELLDRMR RWADAHEAEP
DAKARALLDY LNAVCRPDGR HWFDERVVVF TEYRDTQIWL AGLLRQEGLA GERLGLLHGG
LSVDEREQLR LAFQAEPSEH PMRVLLATDA ASEGIDLQNH CHRLVNYDIP FNPNKLEQRI
GRIDRYGQRR SPEIRHFVGS GWSGSVDSFE ADLEFLSRVV KKVAQMKADL GSVNAVLSDR
VQRRMLGERI DLGPDDLDVG PGGSVAAGGT VPVAENVREQ VRRLRANLDD TVRELGITPA
AVRRVVGTAL SLARQQALTP YVDEKEHAEG LFTVPTLTGS WQRASAGLTE KLRREDLPPG
TPPRQRPITF DSAMAKDRDD VVLAHLGHRL VDMSTRLLRG AVSNADVGLH RVTAVRSDDP
RCEEVLIGAF SRFVLVGADG VRLHEEVLYA GGWAPATGRF RRLENLTVLG DLVGTALAAG
RPVSGETRER LAERWPAVRP GVLSALEWRT RTRQESLTRL LGQRRAAEEN RITTILDQFA
ATLRGAIEDP ENDEDALFSR FEIARSREEL AQYRKDRQAW QDRLDRLDQE RRRELDVIAQ
RYRDPRQHQF PVAVVLVVPA AEEAR
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