| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2536 |
|---|
| Symbol | |
|---|
| ID | 3904680 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 3000255 |
|---|
| End bp | 3000854 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637879863 |
|---|
| Product | putative serine/threonine kinase anti-sigma factor |
|---|
| Protein accession | YP_481629 |
|---|
| Protein GI | 86741229 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCCC CGGCGACCTC GACGAGCGCA CGCCCACGCC TGGCGCGCTC GTCCACGGTC
CGGCAGTTCG AGGCCACGGC CAAGACGGTG AGCGCGGCCC GCCAGCACAC CACGGCGACG
TTGGCTGCCT GGGGATTGGC CGCAGTTGCG GATACGGCGG AACTGCTGGC CTCGGAGCTC
GTGACCAACG CGTGCCGGGC GTCGGCAGGC CGGAGCGGCG TGATCGCCAT GCGCCTGACC
CGCACGGACG CCGATTTGGT CATTGAGGTC TGGGATGCCA ACCAGACCGC GCCGGTGCGG
CGAAAGCCTG GAGACGACGC CGAAGGTGGG CGCGGGCTTT TGCTGGTGGA CGCCCTGAGC
GCCCGGTGGG CGTACTACCG CCCCCGCTCC GGCGGCAAGG TGGTCTGGTG CAGCCTGCCT
CTGGCGGCCC CGGCCCACGT CCTCCCCGAG GACGCCGAAC CGCTACCCCA CCGTCCGGCC
TCATCCGGCC CCGCCCAGCC CGCCGAGGTC TTCACGGACC TGGTGGTGCT CCGGCGGGTG
GCTGACGGCC TCCGCGCGCT GGACTGGGAC CTCCCGCCGG GTGAAGACGC GCGGCCGTGA
|
|---|
| Protein sequence | MTAPATSTSA RPRLARSSTV RQFEATAKTV SAARQHTTAT LAAWGLAAVA DTAELLASEL
VTNACRASAG RSGVIAMRLT RTDADLVIEV WDANQTAPVR RKPGDDAEGG RGLLLVDALS
ARWAYYRPRS GGKVVWCSLP LAAPAHVLPE DAEPLPHRPA SSGPAQPAEV FTDLVVLRRV
ADGLRALDWD LPPGEDARP
|
|---|
| |