Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2516 |
Symbol | |
ID | 3904660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2972892 |
End bp | 2973929 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637879846 |
Product | amidohydrolase 2 |
Protein accession | YP_481612 |
Protein GI | 86741212 |
COG category | [R] General function prediction only |
COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.125947 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGTCA AGGACAATGA GCGATACTTC ATCGTGGATT CCCACCTGCA CTTCTGGGAT GGGAGCCCGG AAAACCAGGC GAACCGCTAC GGCAAAGGTT TCATCGACTG CTTCTACGAT TACCATGTGA ATCTGAGCCC GCAGGAGTAC CTCTGGCCGC GGGAAAAGTT CCAGAAGTAC TCTGCGGAAG TCATGGTGAA GGACCTGTTC GAGGACGGTT ACGTCGACAA GGGGATCTTC CAGCCCACTT ATCTGACGGA CTTCTACCGG AATGGTTTCA ACACCACCGA GCAGGACGGC GCGCTCGCCG AGCGGTACCC CGGCAAGTTC ATCGTGAACG GCGCCTTCGA CCCGCGTGAC GGCGAACTGG GCCTGTCGAA GCTGGCGGAC CTGGCGGCAC GCTGGAACCT CAAGGGTGTG AAGCTCTACA CGGCGGAGTG GAAGGGCGAG TCCAAGGGCT ACAAGCTGAC CGACCCGTGG GTCTACCGGT ATCTGGAGAA GTGCCAGGAA CTCGGCATCC GCAACATCCA CATCCACAAG GGCCCGACGA TCTACCCGCT GAACCGGGAC GCGTTCGATG TCGCCGACGT CGATGATGTG GCCACCGAAT TCCCCGAGCT GCGGTTCATC ATCGAACACG TCGGACTGCC CCGGTTGGAG GACTTCTGTT GGATCGCCAC GCAGGAGCCC AATGTCTACG GTGGGCTCGC GGTGGCCATG CCGTTCATCC ACAGCCGGCC GCGCTACTTC GCGCAGATCA TCGGTGAGCT CCTCTACTGG CTCGACGAGA ACCGGCTGAC CTTCTCGAGT GACTACGCGA TCTGGCACCC CAAGTGGCTG GTCGAGAAGT TCGTCGACTT CCAGATCCCG GCGGACATGC AGGCCGAGTA CGGCGTGCTC ACCCCCGACA TCAAGCGCAA AATTCTCGGT CTCAACGCGG CCGCGCTCTA CGACATCGAG GTACCGGCCG AGGTTAGCGG GGCGGGCAGC GGTTCTCCGG CGTCGACGCC TCTCGTGGGC GCAGGGCAGT CCGTATGA
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Protein sequence | MYVKDNERYF IVDSHLHFWD GSPENQANRY GKGFIDCFYD YHVNLSPQEY LWPREKFQKY SAEVMVKDLF EDGYVDKGIF QPTYLTDFYR NGFNTTEQDG ALAERYPGKF IVNGAFDPRD GELGLSKLAD LAARWNLKGV KLYTAEWKGE SKGYKLTDPW VYRYLEKCQE LGIRNIHIHK GPTIYPLNRD AFDVADVDDV ATEFPELRFI IEHVGLPRLE DFCWIATQEP NVYGGLAVAM PFIHSRPRYF AQIIGELLYW LDENRLTFSS DYAIWHPKWL VEKFVDFQIP ADMQAEYGVL TPDIKRKILG LNAAALYDIE VPAEVSGAGS GSPASTPLVG AGQSV
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