| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2472 |
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| Symbol | |
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| ID | 3904850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 2917272 |
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| End bp | 2917868 |
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| Gene Length | 597 bp |
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| Protein Length | 198 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637879802 |
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| Product | sigma-24 |
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| Protein accession | YP_481568 |
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| Protein GI | 86741168 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0863635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGGGCGG TGCGGGCGGT GCAGGGCATT CCCAAAGATC CAGCAGCCGT CACTGCCGGC
GACGCCGCCA CTCTGCTGCC GGCCGACAAG ATCCAGGTGA ATCTTCACGA TCTTGATCGG
GAGACCGCCA TCGCGCGGCT CTTCAACACC CACTACGTCT CATTGGTACG ACTGGCCGCC
CTCCTCGGCG CGGACGACCC GGAGGATATC GCCGCGCAGG CGTTCTACGA GCTCTACCGG
CGCTGGCGAA AACTGCGGGA CTCGACCGCC ACCCTGCCGT ATCTACGTAG CATAGTCTGC
AATCTCACCC GAATGCGACT GCGCCATCTC CAGGTTGTCC GAAAAAACAT GGGATGGCCA
TCAGACCAGG TAGAATCGGC GGAGACGCAA GCGCTGCTGC GGCACGAACA GCGAGCTGTA
GTCGTCGCGT TACAGCGGCT GTCGCCGCGC CAGCGGGAGG CCCTGGTACT GCGGTACTGG
CTCGATCTGA AGGAATCCGA GATAGCCGCA GTCATGGGGA TTTCCTGCGG CGCAGTGAAA
TCCCATGTGG CGCGAGGAAT GACGGCGCTG TCCCGCGCGA TGGAGTCCCA GACATGA
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| Protein sequence | MRAVRAVQGI PKDPAAVTAG DAATLLPADK IQVNLHDLDR ETAIARLFNT HYVSLVRLAA
LLGADDPEDI AAQAFYELYR RWRKLRDSTA TLPYLRSIVC NLTRMRLRHL QVVRKNMGWP
SDQVESAETQ ALLRHEQRAV VVALQRLSPR QREALVLRYW LDLKESEIAA VMGISCGAVK
SHVARGMTAL SRAMESQT
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