Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2416 |
Symbol | |
ID | 3906399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2805957 |
End bp | 2807474 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637879746 |
Product | ABC transporter related |
Protein accession | YP_481512 |
Protein GI | 86741112 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.48904 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.517623 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATGCCG TGAGCACGGT GAGCACGAAG GCGGACGCCG TGGCGGGCCG GAACATCGTG GAGCTCACCG GGCTGTCCGT CGCGGGCACC GGCGTGACCG GCGCGTCCGA GCGGGTGCTG CGGACGATCC GCGGCACGGT GATCGGACTG GTCCCGCAGG ACCCGATGGT CGGGCTCAAC CCGACGATGC GGATCGGCGG GCAGCCGGCC GAGGCCGTGC GCCGCAGCGG CGTTGACAAG CGGCTCGTCT CCGCCGAGGT GGTCGAGGCG CTCGACCGGG CCGGGCTCGA CAACCCGGTC CTGCGGGCCC GGCAGTACCC GAACCAGCTC TCCGGCGGCA TGCGGCAACG GGTCCTCATC GCGATCGCGA TCGCCGCGCA TCCGCGCCTC ATCGTCGCCG ACGAACCGAC GAGCGCGCTC GACGTCACCG TGCAGCGGCG GATCCCCGAC CATCTCGGCC GCCTGGTTGC CGAGTCCGGC ACCTCGCTGC TCATCATCAC CCACGACCTC GGGGTCGCGG CCGACCAGGC CGACCGGGTC GTCGTGATGC GGCGCGGCCG GGTCGTCGAA CGCGGGGCAC CGGCGTCGAT CCTGCGCACC CCGCGCGACC CTTACACCCG CCACCTCATC GAGGTGGCGC CGGCGTTGTC GTCCACCGGC GGCCTCGTCC CGCGCTTCCC CGAGGCGCCC CCGGCTCCCG AGCTGCTGCG GCTAGAGGGG ATCACGAAGG ACTTCCGGCT GCCCCGGACC CGGGGCGGGG AGCGGGTCTT CCGGGCGCTG GACGAGGTGT CCCTGTCGGT GCGGGCGGGC CAGACCCTGG GCCTCCTCGG CGAGTCCGGG TCGGGCAAGA CCACCGCGCC GCGCATCGCG ATGGGCCTGG AGAAGCCGAC CAGCGGCCGG ATCCACCTCG ACGGGCAGGA CATCACCTCC GCCGGCTGGT CGCAGCTGCG GCCGCTGCGG CGGCGGTTCC AGCTTGTCCA CCAGAACCCG TTCTCCTCAC TGGACCCGCG GTTCACCGTC GGGGAGAGCA TCGCCGAGCC GCTGCTCTCC TTCCGCGTCG GCGACCGGGC CAGCCGCGCC GCCCGGGTGC GCGAGCTGCT CGATCAGGTC GCCCTGCCCG CCGCGTTCCG CGGCCGCCGG CCGATCGAGC TCTCCGGCGG CCAGCGCCAG CGGGTCGCGA TCGCCCGGGC ACTCGCGATC GAACCCGAGC TGGTCTTCCT CGACGAACCC GTCTCGGCGC TCGACGTGTC GGTGCAGGAC CAGATCCTGA CCCTGCTCCT GCGGCTGCAG CAGGAGCTCG GGGTCGCCTA CTTCTTCATT TCCCACGATC TCGCCGTCGT GGCCCAGCTC GCCCACGAGG TCGCGGTGCT GCGCGCCGGC CGCATCGTCG AGAGTGCTCC GGCGGCCGAC GTCCTCACCG CGCCGACGCA GGACCACACC CGCGAGCTGC TCGGCGCGAT TCCCGGGCAA CGGTTCGCGG CCGCACTCGC CGCCGCCCAA GGAAAGGACG CACGATGA
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Protein sequence | MNAVSTVSTK ADAVAGRNIV ELTGLSVAGT GVTGASERVL RTIRGTVIGL VPQDPMVGLN PTMRIGGQPA EAVRRSGVDK RLVSAEVVEA LDRAGLDNPV LRARQYPNQL SGGMRQRVLI AIAIAAHPRL IVADEPTSAL DVTVQRRIPD HLGRLVAESG TSLLIITHDL GVAADQADRV VVMRRGRVVE RGAPASILRT PRDPYTRHLI EVAPALSSTG GLVPRFPEAP PAPELLRLEG ITKDFRLPRT RGGERVFRAL DEVSLSVRAG QTLGLLGESG SGKTTAPRIA MGLEKPTSGR IHLDGQDITS AGWSQLRPLR RRFQLVHQNP FSSLDPRFTV GESIAEPLLS FRVGDRASRA ARVRELLDQV ALPAAFRGRR PIELSGGQRQ RVAIARALAI EPELVFLDEP VSALDVSVQD QILTLLLRLQ QELGVAYFFI SHDLAVVAQL AHEVAVLRAG RIVESAPAAD VLTAPTQDHT RELLGAIPGQ RFAAALAAAQ GKDAR
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