Gene Francci3_2411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2411 
Symbol 
ID3906394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2798766 
End bp2799788 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content78% 
IMG OID637879741 
Productmethyltransferase type 12 
Protein accessionYP_481507 
Protein GI86741107 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG5459] Predicted rRNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.321714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.120209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGGCCG GTCTGCTCGC CGCGGCCGCG GCCGAGACGG GCGCGTCCGT GGGGACCCCG 
CCGGCGCGGG CGATGTCCCG CGCCTACCGG GAGTTGTCCG ACCGGTATCG CGCGAACACC
GCCACACCGG GTGACGGCGA GCTGACGGCG GATCACGTCC AGGCCTACCT CGCCGCCCGA
CTGCCCGCGA CGCTGGCGGT CACCCGCGCG GTTCTCGGTG AGGTGGCGCT GCGCCGCCCG
GACTGGCGGC CCGGGTCCGT CCTCGACCTG GGCGCGGGTC CCGGGACGGC GACCTGGGCC
GCGCTGGCGG TCTTCCCCGG CGTGACCCGG GCCGTCCTGG TCGAGCGGTC CGCGCTGATG
ATCGACGTCG GTCGCCGGCT GGCCCGCCGC GGTGGCGCGC CGGCGCTGGG CACCGCGACC
TGGCAGCGCA CGTCCGTGCT CACCCCGCCC GGCGACGGCG CGGACCGGGC CGACCTGACA
GTGGCGGCCT ATGTGCTGGG CGAGCTCGCC GACGGCGACC GGGCCGCAGC CGTGGCCGCG
TGGTGGCGGG CCACCGCGGC GGAGTTGGTC ATCATCGACG CGGGAACCCC GGCCGGCTTC
GCGCGGATCC GCGCCGCGCG CTCGGCGCTC GTCGAGACCG GCGCGACCAT CACCGCGCCC
TGCCCCGCCG ACGACGACTG CCCGATGACG GCGGGGGACT GGTGCCACTT CGGCCGGCGG
GTCGAGCGCA GCGCACTGCA CCGGGCGATG AAGGACGGTG CGCTCGGGTA CGAGGACGAG
AAGTACTCCT ACCTCGTCGC GTCGCGCCGG CCGCCCGCGC ACGCCGCCGG TCGGGTGCTG
CGCGTGCCGC GGGCCCGCTC GGGCCATGTC CGCCTGACGG TCTGCGAGGC GCCGCGGCAG
GGTGACGTGG TCATGCCGCG GCAGCGTGAC GTGGTCGTTT CCCGCAGCGA GAAGGAGGCC
TACCGCTGGG CCCGGCGGGC CTCCTGGGGG GACGCCGTCC CGCCCGGCAC CGGGCCGCGC
TGA
 
Protein sequence
MVAGLLAAAA AETGASVGTP PARAMSRAYR ELSDRYRANT ATPGDGELTA DHVQAYLAAR 
LPATLAVTRA VLGEVALRRP DWRPGSVLDL GAGPGTATWA ALAVFPGVTR AVLVERSALM
IDVGRRLARR GGAPALGTAT WQRTSVLTPP GDGADRADLT VAAYVLGELA DGDRAAAVAA
WWRATAAELV IIDAGTPAGF ARIRAARSAL VETGATITAP CPADDDCPMT AGDWCHFGRR
VERSALHRAM KDGALGYEDE KYSYLVASRR PPAHAAGRVL RVPRARSGHV RLTVCEAPRQ
GDVVMPRQRD VVVSRSEKEA YRWARRASWG DAVPPGTGPR