Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2411 |
Symbol | |
ID | 3906394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2798766 |
End bp | 2799788 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 637879741 |
Product | methyltransferase type 12 |
Protein accession | YP_481507 |
Protein GI | 86741107 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG5459] Predicted rRNA methylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.321714 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.120209 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGTGGCCG GTCTGCTCGC CGCGGCCGCG GCCGAGACGG GCGCGTCCGT GGGGACCCCG CCGGCGCGGG CGATGTCCCG CGCCTACCGG GAGTTGTCCG ACCGGTATCG CGCGAACACC GCCACACCGG GTGACGGCGA GCTGACGGCG GATCACGTCC AGGCCTACCT CGCCGCCCGA CTGCCCGCGA CGCTGGCGGT CACCCGCGCG GTTCTCGGTG AGGTGGCGCT GCGCCGCCCG GACTGGCGGC CCGGGTCCGT CCTCGACCTG GGCGCGGGTC CCGGGACGGC GACCTGGGCC GCGCTGGCGG TCTTCCCCGG CGTGACCCGG GCCGTCCTGG TCGAGCGGTC CGCGCTGATG ATCGACGTCG GTCGCCGGCT GGCCCGCCGC GGTGGCGCGC CGGCGCTGGG CACCGCGACC TGGCAGCGCA CGTCCGTGCT CACCCCGCCC GGCGACGGCG CGGACCGGGC CGACCTGACA GTGGCGGCCT ATGTGCTGGG CGAGCTCGCC GACGGCGACC GGGCCGCAGC CGTGGCCGCG TGGTGGCGGG CCACCGCGGC GGAGTTGGTC ATCATCGACG CGGGAACCCC GGCCGGCTTC GCGCGGATCC GCGCCGCGCG CTCGGCGCTC GTCGAGACCG GCGCGACCAT CACCGCGCCC TGCCCCGCCG ACGACGACTG CCCGATGACG GCGGGGGACT GGTGCCACTT CGGCCGGCGG GTCGAGCGCA GCGCACTGCA CCGGGCGATG AAGGACGGTG CGCTCGGGTA CGAGGACGAG AAGTACTCCT ACCTCGTCGC GTCGCGCCGG CCGCCCGCGC ACGCCGCCGG TCGGGTGCTG CGCGTGCCGC GGGCCCGCTC GGGCCATGTC CGCCTGACGG TCTGCGAGGC GCCGCGGCAG GGTGACGTGG TCATGCCGCG GCAGCGTGAC GTGGTCGTTT CCCGCAGCGA GAAGGAGGCC TACCGCTGGG CCCGGCGGGC CTCCTGGGGG GACGCCGTCC CGCCCGGCAC CGGGCCGCGC TGA
|
Protein sequence | MVAGLLAAAA AETGASVGTP PARAMSRAYR ELSDRYRANT ATPGDGELTA DHVQAYLAAR LPATLAVTRA VLGEVALRRP DWRPGSVLDL GAGPGTATWA ALAVFPGVTR AVLVERSALM IDVGRRLARR GGAPALGTAT WQRTSVLTPP GDGADRADLT VAAYVLGELA DGDRAAAVAA WWRATAAELV IIDAGTPAGF ARIRAARSAL VETGATITAP CPADDDCPMT AGDWCHFGRR VERSALHRAM KDGALGYEDE KYSYLVASRR PPAHAAGRVL RVPRARSGHV RLTVCEAPRQ GDVVMPRQRD VVVSRSEKEA YRWARRASWG DAVPPGTGPR
|
| |