Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2273 |
Symbol | |
ID | 3904807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2650987 |
End bp | 2652633 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 637879604 |
Product | amidohydrolase 3 |
Protein accession | YP_481370 |
Protein GI | 86740970 |
COG category | [R] General function prediction only |
COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000251209 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000881388 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGATCCGC GTCACGTCCA GGGCGGCAGA CTCACCACCG TGACCGACGA CGCCCCCCGA CCCGCCCGCA CCATCCTGTA CCGGGGCGGG CGCATCCACA CCCCGGCCGA CCCGTTCGCC ACCGCGATGC TCACCGACGG CGACACCATC GCCTGGGTCG GCTGCGACGC CGTCGCCACC CATCTCGACG CCGACACCGT CATCGACCTC GACGACGCCC TGATCACCCC CGCCTTCGTC GACGCCCACG TCCACACCAC CGCCACCGGC CTGGCCCTGT CCGGCCTCGA CCTCACCGGC ACCCCCACCC GCGCCGCCGC CCTGTGCGCC CTCACCGCAC ACGCCCACCG CCACCCCACC ACCACCCTGT TCGCCACCGG CTGGGACGAG ACCACCTGGA CCGACGACCC ACGCCCACCC ACCGCCACCG ACCTCGACCG CGCCGCTGGC GGCGCGGTCG TCTACCTCGC CCGCGTCGAC GGCCACAGCG CGGTGATCTC CTCCGCGCTC GCCGCCGCAT CCGGCGCCCC CCACCACCCC GGCTGGCACC CCGACGGCAC CGTCACCGGC CACGCCCACC ACCTCGCCCG CCGGACCGCC GACGCCACCC TGACCCCCAC CGGGCGCCGC GACGCCTGGA ACACCACCCG CACCCGCGCC GCCGCCCTCG GCATCGTCGC CCTGCACGAG ATGGCCGGAC CCGACATCTC CTCCGCCGAC GACCTCGCCG GCCTGCTCGC CCACGCCCGC GCCGTCCCCG GACCCGACAT CGTCGGCTAC TGGGCCGGGG ACATCGCCAC CGCCGTCGAA CTCGGCACCG CCTGGGGCGG CGACGCCTTC GTCGACGGCT CCCTCGGCTC CCACACCGCC GCCCTGCACA CCCCCTACGC CGACATCCCC CACATCCGCG CCACCACCCA CCTCGACGCC GACACCATCC GCGACGCCGT CCTCGACTGC GCCGACGCCG GCCTACAGGC CGGCTTCCAC GCCATCGGCG ACGCCGCCAT CACCACCGTG CTGGACGGCC TCGAAGCCGC CGCCACCACC CTCGGCCACA ACCAGATCAC CGCCGCCCGC CACCGCCTCG AACACGCCGA AATGACCACC CCCGACCACC TGCCCCGCAT CGCCGCCCTC GGCCTCGTCG CCAGCGTCCA ACCCGCCTTC GACGCCCGCT GGGGCGGCGA GAACGGCATG TACGCCACCC GCCTGGGCCC CACCCGTGCC GCCGCCATGA ACCCCTTCGC CGCCATGAAC CGCGCCGGCA TCCCCCTGGC GTTCTCCTCC GACGCCCCCG TCACCCCCCT GGACCCCTGG GGCGCCATAC GCGCCGCCGT CACCCACCAC ACCCCCACCG CCCGCCTCTC CGCCCGCGCC GCGTTCACCG CCGCGACCCG AGGCGGCTGG CGCGCCGCCC GCGCCGACAC CGACGGCCAC GGCACCCTCG CCCCCGGCGC CCCCGCCACC TACGCCGTCT GGGCCGTGCC CGGCGAACTC GTCGCCCAGG TCCCCGACGA CCGCATCGCC GCCTGGTCCA CCGACCCCCG CGGCGCCGTC GCCGCCCTGC CCGACCTGTC CGCGCCCGCC CCGACCTGCC TACGCACCGT CCTGCGCGGC CGCATCCTGC ACGACACCCT CACCTGA
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Protein sequence | MDPRHVQGGR LTTVTDDAPR PARTILYRGG RIHTPADPFA TAMLTDGDTI AWVGCDAVAT HLDADTVIDL DDALITPAFV DAHVHTTATG LALSGLDLTG TPTRAAALCA LTAHAHRHPT TTLFATGWDE TTWTDDPRPP TATDLDRAAG GAVVYLARVD GHSAVISSAL AAASGAPHHP GWHPDGTVTG HAHHLARRTA DATLTPTGRR DAWNTTRTRA AALGIVALHE MAGPDISSAD DLAGLLAHAR AVPGPDIVGY WAGDIATAVE LGTAWGGDAF VDGSLGSHTA ALHTPYADIP HIRATTHLDA DTIRDAVLDC ADAGLQAGFH AIGDAAITTV LDGLEAAATT LGHNQITAAR HRLEHAEMTT PDHLPRIAAL GLVASVQPAF DARWGGENGM YATRLGPTRA AAMNPFAAMN RAGIPLAFSS DAPVTPLDPW GAIRAAVTHH TPTARLSARA AFTAATRGGW RAARADTDGH GTLAPGAPAT YAVWAVPGEL VAQVPDDRIA AWSTDPRGAV AALPDLSAPA PTCLRTVLRG RILHDTLT
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