| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2196 |
|---|
| Symbol | |
|---|
| ID | 3906335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. CcI3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007777 |
|---|
| Strand | + |
|---|
| Start bp | 2567328 |
|---|
| End bp | 2568473 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637879528 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_481294 |
|---|
| Protein GI | 86740894 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.455714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGAACC TGCCGGTGGG GCTGCACTCG CACGGGCTGC GCCGGCTGGT GGCGCTGGAG
GCCGCGCGGG GGTCGTTCGA CGCCGCGGTC GCCGCGGTCG CCGCGGTCGC CCGGGCGACC
GGGGTGAGGG TCGGTAAGCG CCAGCTTGTC GAGCTGGCCC GGTCGGTGGC GGTCGACGTG
GCCGGTTTCT ACACGGCCCC GGTGTGCGGG CCGGTGCCCG ACGGGCTGCT GTTGGTGTTG
CAGTTCGACG GGAAAGGTGT GGTGATGCGG CCGGAGGGGC TGCGCCCGGC CACCGCGAAG
GCGGCCGCCG CGGGGCGGAA GCTGGCGACA CGGCTGTCGC CCGGGGAGAA GAACGGGCGG
AAACGGATGG CGGAGTTGGC CGCGGTCCAC GACGTCGTCC CGGTCGTGCG TACCCCGGCT
GACGTGCTGC CCCCGCCCGG GGTGACCGGG CCCGACGGGC CGAAGGCCAC CGGAAAGTGG
GTGACGGCCT CGGTCGTCGA CGACATCGCC ACGGTGGTGG CGGCCGGGTT CGACGAGGCC
GAACGGCGCG ACCCGACCCA CGCCCGGACC TGGATCGTGC TCGTCGACGG CAACAACACC
CAGCTCGACG CCGTCACCGC CGAGGCGGCC CACCGCGGCG TCGTCGTCCA CATCGTCGTC
GATCTCATCC ACGTCCTGGA ATACCTGTGG AAGGCCGCCT GGTCGTTTTT CACCACCGGG
GACCCCGACG CCGAGGCCTG GGTCACCGAC AAGGCCCGCA AGGTACTGGA AGGCCGGGCG
GGCCAGGTCG CCACCGGCAT CCGCCGCCGC GCCACCTACA ACGGCTACAA CCAGGCCGAA
CGCAAGGGCG CCGACACCTG CGCCGACTAC CTCGACGCCA AGGCACCCTG GCTTGACTAC
GCCACCGCCC TGGTGGGCGG CTGGCCGATC GCGACCGGTG TCATCGAGGG AGCCTGCCGC
CACCTCGTCA AGGACCGGAT GGACATCACC GGTGCCCGAT GGGGACTCGA CGGCGCCGAA
TCCGTGCTCC TGCTCCGCGC CCTGGTCACC AACGGCGACT TCGACGACTA CTGGAAGTAC
CACATCGCAC AGGAACAGCA CCGCAACCAC CGCAACCAGT ACGCCGACAA CCGCATACCG
CCCTGA
|
|---|
| Protein sequence | MLNLPVGLHS HGLRRLVALE AARGSFDAAV AAVAAVARAT GVRVGKRQLV ELARSVAVDV
AGFYTAPVCG PVPDGLLLVL QFDGKGVVMR PEGLRPATAK AAAAGRKLAT RLSPGEKNGR
KRMAELAAVH DVVPVVRTPA DVLPPPGVTG PDGPKATGKW VTASVVDDIA TVVAAGFDEA
ERRDPTHART WIVLVDGNNT QLDAVTAEAA HRGVVVHIVV DLIHVLEYLW KAAWSFFTTG
DPDAEAWVTD KARKVLEGRA GQVATGIRRR ATYNGYNQAE RKGADTCADY LDAKAPWLDY
ATALVGGWPI ATGVIEGACR HLVKDRMDIT GARWGLDGAE SVLLLRALVT NGDFDDYWKY
HIAQEQHRNH RNQYADNRIP P
|
|---|
| |