Gene Francci3_2179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2179 
Symbol 
ID3906779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2553151 
End bp2553663 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content63% 
IMG OID637879512 
Producthypothetical protein 
Protein accessionYP_481278 
Protein GI86740878 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.250691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.412399 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGGC GAGAACGCGC CGAGACCTGG CCGCCGACTG AGACCAGAAT TATTTTAGAC 
CGCCTGTCCG AGCTAGCTGC ACTGGTACAA GATCAGGCAA GAGTTGCGGA TAATCAGGAG
GTCGTTTCCT GGCTTGCGCG ACTACTGGTG ATCCGAAGCT GCGGATATCT GGAGCAGACC
GTGGCGGGGA CATTCCGCGC CTACACCAGC AGGCTGTCCT ACGGCCACGT CAGGAACTTC
TCGCTTGGCT GGTTGGAGCG GACGCAGAAC CCGACGCCTG CGGCGCTCGA GACCCTGGCC
GGGCGCTTCG ACCAAGGCCT GCGCCAGGAG CTGAGCGCAC TGCTCGACGC GGACGACGGT
CGGCTGCGCC GCGAGCTGGC CACGTTAGTC GATCGGCGGA ACAGGATCGC CCACGGCCTC
AACGAAAGCG TCGGAGTCAG GAAAGCATTA GAGCTCCACA GAGTGGCCTG CGAGGCCGCC
GACTGGTTCA TTCTTCGCTT TGGGCCTTCC TGA
 
Protein sequence
MSRRERAETW PPTETRIILD RLSELAALVQ DQARVADNQE VVSWLARLLV IRSCGYLEQT 
VAGTFRAYTS RLSYGHVRNF SLGWLERTQN PTPAALETLA GRFDQGLRQE LSALLDADDG
RLRRELATLV DRRNRIAHGL NESVGVRKAL ELHRVACEAA DWFILRFGPS