Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2155 |
Symbol | |
ID | 3905545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 2524459 |
End bp | 2525286 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637879490 |
Product | phosphonate-binding periplasmic protein |
Protein accession | YP_481256 |
Protein GI | 86740856 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | [TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.655233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.290488 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAGCG GGCCGGTGGT CGGGGGCAGG TCCGCCAAAC TTCAGGAGGA CTACCAGTCC TCGATCGATT TGCTGCGGAA GGAAACCGGG AAGACGATCC GGTTCCAGCG GGCAACCGAC TACGCCGCCG TCATCGAGGG GCAGCGCAGC GGCAAGGTCG ATATCGCGCT GTACGGGGCA CTGTCCTATC TGGTCGCCCG CACCTCCGGA GTGCGGGCGA CGGCGGTCGC CGCGGCGCTC GCGGAGAAAG GTGGTTCGCC GGGCTATCGC TCCTACGGCG TGGTGAAGAC CGGTTCGCCG ATTCACGACC TCGCGGGTTT CAAGGGTAAG AAGGTCTGCC TCGTCGACCC GAACTCGACC TCGGGCTACC TCTATCCGCG GGCTGGGCTG ATCGACGCCG GGGTGAACCC CGACAGCGAG ATCACCGCGG TGCTGGCCGG CACGCACGAT GCGTCGGCGC TCGGCGTGGC CAAGGGGCAG TGCGACGCCG GGTTCGCCTA CGACGCGATG GTCGACAAGA AGCTGATCGA GAAGGGTCAG CTCAAGGCCG GCGAGCTGAC CACGGTGTGG AAGTCCGACC TCATCCCCGG ATCACCGATC GCGATCAGTG ACGACCTCGA TCCCGCGCTC AAGGACAAGA TCGCCAAAGT GATCCAGGAG CACATGAACA TCGACTACCT CGAGTCCCAT GGGTTCTGCA CACCCGGTAA GTGCATGGTC GACGAGTCCG GCGACTGGGG TTTCGTCAAG GTCGCCGACA CCTTCTTCGA CCCGGTGCGG CACGTCTGCG AGGTCACGAA GGCCAAGAGC TGCACGGCGG CGGAGTGA
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Protein sequence | MISGPVVGGR SAKLQEDYQS SIDLLRKETG KTIRFQRATD YAAVIEGQRS GKVDIALYGA LSYLVARTSG VRATAVAAAL AEKGGSPGYR SYGVVKTGSP IHDLAGFKGK KVCLVDPNST SGYLYPRAGL IDAGVNPDSE ITAVLAGTHD ASALGVAKGQ CDAGFAYDAM VDKKLIEKGQ LKAGELTTVW KSDLIPGSPI AISDDLDPAL KDKIAKVIQE HMNIDYLESH GFCTPGKCMV DESGDWGFVK VADTFFDPVR HVCEVTKAKS CTAAE
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