Gene Francci3_2155 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2155 
Symbol 
ID3905545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2524459 
End bp2525286 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content65% 
IMG OID637879490 
Productphosphonate-binding periplasmic protein 
Protein accessionYP_481256 
Protein GI86740856 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID[TIGR01098] phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.655233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.290488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCG GGCCGGTGGT CGGGGGCAGG TCCGCCAAAC TTCAGGAGGA CTACCAGTCC 
TCGATCGATT TGCTGCGGAA GGAAACCGGG AAGACGATCC GGTTCCAGCG GGCAACCGAC
TACGCCGCCG TCATCGAGGG GCAGCGCAGC GGCAAGGTCG ATATCGCGCT GTACGGGGCA
CTGTCCTATC TGGTCGCCCG CACCTCCGGA GTGCGGGCGA CGGCGGTCGC CGCGGCGCTC
GCGGAGAAAG GTGGTTCGCC GGGCTATCGC TCCTACGGCG TGGTGAAGAC CGGTTCGCCG
ATTCACGACC TCGCGGGTTT CAAGGGTAAG AAGGTCTGCC TCGTCGACCC GAACTCGACC
TCGGGCTACC TCTATCCGCG GGCTGGGCTG ATCGACGCCG GGGTGAACCC CGACAGCGAG
ATCACCGCGG TGCTGGCCGG CACGCACGAT GCGTCGGCGC TCGGCGTGGC CAAGGGGCAG
TGCGACGCCG GGTTCGCCTA CGACGCGATG GTCGACAAGA AGCTGATCGA GAAGGGTCAG
CTCAAGGCCG GCGAGCTGAC CACGGTGTGG AAGTCCGACC TCATCCCCGG ATCACCGATC
GCGATCAGTG ACGACCTCGA TCCCGCGCTC AAGGACAAGA TCGCCAAAGT GATCCAGGAG
CACATGAACA TCGACTACCT CGAGTCCCAT GGGTTCTGCA CACCCGGTAA GTGCATGGTC
GACGAGTCCG GCGACTGGGG TTTCGTCAAG GTCGCCGACA CCTTCTTCGA CCCGGTGCGG
CACGTCTGCG AGGTCACGAA GGCCAAGAGC TGCACGGCGG CGGAGTGA
 
Protein sequence
MISGPVVGGR SAKLQEDYQS SIDLLRKETG KTIRFQRATD YAAVIEGQRS GKVDIALYGA 
LSYLVARTSG VRATAVAAAL AEKGGSPGYR SYGVVKTGSP IHDLAGFKGK KVCLVDPNST
SGYLYPRAGL IDAGVNPDSE ITAVLAGTHD ASALGVAKGQ CDAGFAYDAM VDKKLIEKGQ
LKAGELTTVW KSDLIPGSPI AISDDLDPAL KDKIAKVIQE HMNIDYLESH GFCTPGKCMV
DESGDWGFVK VADTFFDPVR HVCEVTKAKS CTAAE