Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_2121 |
Symbol | |
ID | 3905511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2487872 |
End bp | 2489044 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637879456 |
Product | transposase, IS4 |
Protein accession | YP_481222 |
Protein GI | 86740822 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5433] Transposase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.682362 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCG CACCAGTATT ACCGCCTGCC CCTGTTCTCG ATCGGCTGGC TGCCGTCGGC GCCGGCAACC AGCCTCCGTC GCCGGCGGGT CTGCTGGCGG TCTTCAACCA GCTACCGGAC CCCCGGAAGC CCCGCGGCAG GCGGCACAGC CTGGCCGCTG TGCTGACGCT GGCGACCTGC GCGGTGCTCG CCGGGGCGCG GTCGTTCACC GCGATCGGTG AATGGTCCGC CGACGCCGGC CAGGCGGTCG CGGGCCTGCT CGGCGTCTCT CGAGTGCCCG AGGAGTCGAC GTTTCGCCGG GTACTCGCCG CACTCGACGC CGACGCCCTG GATACGGCGC TGGGAGCATG GGCCGCCGCG GCGACCACCC CGCCGGCCGG GACGCGGCGG CGGCTCGCGG TCGACGGCAA GACGCTGCGC GGCTCCCGCA CGCCTGACAG TCCGGGCCGC CACCTGCTCG CCGCGCTCGA CCACACCAGC GGTGTCGTGC TCGGCCAGGT CGCCGTCGAC GCGAAGTCGA ACGAGATCCC GGCGCTGCCC GTCCTGCTCG CCGACCTGGA CCTGACCGAT GTGATCGTGA CCGCGGATGC TCTACACACC CAGCGACAGA CCGCATCCTG GCTGGTCAGC CGGCATGCGC ACTACATCCT GACGGTGAAG GCCAACCAGC CGGCGCTATA CGCCCAGCTC GCCGCCCTGC CCTGGCGCCG GGTGAAGACC GCCGCGCGCA CCGTCGAACG CGGCCACGGC CGCCGCGAGC GGCGCACCGT GAAGACCACC GAGGTCCGCG CGGGACTACT CTTCCCGCAC GCCGTGCAGG CAGTGCAGGT CACCCGCCGC CGCCAGCCGC TCGCCGACGG GCCGGCCACG ACCGAGATCG TCTACCTTGT CACCAGCCTG CCGACCCACC AGGCCAGCCC CACGCTGCTG GCCACCTACG CCCGCGAGCA CTGGCTCGTG GAGAACCGGC TGCACTGGGT CCGCGACGTC ACCTTCGGGG AGGACCTCAG CCAGGTCCGG ACCGGCCACG CTCCCCAGGT CATGGCCAGC CTGCGCAACC TGGCGATCGC GATCCTTCGC CTGACCGGCG CCACGAACAT CGCCCAGGCA ATCCGACACC ACGCGCGGCG CCCCGAACGA CCACTAGAGA CGATCAAGAG CCTTGCTTGC TAA
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Protein sequence | MPAAPVLPPA PVLDRLAAVG AGNQPPSPAG LLAVFNQLPD PRKPRGRRHS LAAVLTLATC AVLAGARSFT AIGEWSADAG QAVAGLLGVS RVPEESTFRR VLAALDADAL DTALGAWAAA ATTPPAGTRR RLAVDGKTLR GSRTPDSPGR HLLAALDHTS GVVLGQVAVD AKSNEIPALP VLLADLDLTD VIVTADALHT QRQTASWLVS RHAHYILTVK ANQPALYAQL AALPWRRVKT AARTVERGHG RRERRTVKTT EVRAGLLFPH AVQAVQVTRR RQPLADGPAT TEIVYLVTSL PTHQASPTLL ATYAREHWLV ENRLHWVRDV TFGEDLSQVR TGHAPQVMAS LRNLAIAILR LTGATNIAQA IRHHARRPER PLETIKSLAC
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