Gene Francci3_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_2015 
Symbol 
ID3906731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2366944 
End bp2367561 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content73% 
IMG OID637879351 
ProductMarR family transcriptional regulator 
Protein accessionYP_481118 
Protein GI86740718 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.870425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAG CCGCTCGGGA GGCCGCCGGG GAGGCGACTG CCCGAGATGC GACCGCCCGG 
GACGCGACCG CCCGGGACGC GGGCACTCGC GAGGCGGGCA CTCGCGAGGC GGGCACTCGC
GAGGCGGGCA CTCGCGAGGC GGGCACTCGC GAGGCGACAG CTCGCGAGGC GTGGCGCGCC
ATGCTGGCGC TGACCTTCAG CGGCGAGGCG CCCAGCCGGA TGCACACCGT CTGCCAGGCG
TTTGATCTCA CGCCGGCCGC TTTGAAGATC CTTCTGGTGC TGTCGGGGGG CCCGCGCCCG
ATGCGCGAGC TCGTCGAGAT GTTCCGCCAC GACCCGAGCT ACCTGACCAG CGTCGTCGAC
CTGCTCGAGC GCCGCGGCGT CGCCCGGCGC GAGCCGCACC CGACCGACCG GCGGGCCAAG
ACGGTCGCGA TGACCGAGGA GGGCCGACGC GTTCTGGCCC AGGCCCAGGA GATGCTGTCC
GTTCCCCCGG CGTCGCTGCA GGTGCTCTCG CCGGATGAGC AGCAGCAGCT GCTGCGCCTG
CTCATCCGCG TCGTCGACGC GGAGCCCACT ATTCCCACGG CGCTGCGCCC GCGTCCCGTC
ACGTCCCCAT CTGACTGA
 
Protein sequence
MIEAAREAAG EATARDATAR DATARDAGTR EAGTREAGTR EAGTREAGTR EATAREAWRA 
MLALTFSGEA PSRMHTVCQA FDLTPAALKI LLVLSGGPRP MRELVEMFRH DPSYLTSVVD
LLERRGVARR EPHPTDRRAK TVAMTEEGRR VLAQAQEMLS VPPASLQVLS PDEQQQLLRL
LIRVVDAEPT IPTALRPRPV TSPSD