| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_2004 |
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| Symbol | |
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| ID | 3906720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2353276 |
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| End bp | 2354796 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637879340 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_481107 |
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| Protein GI | 86740707 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.331322 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCGACT CGACTCCCCC GGCCCCGCCC CCGGCGCTCC CGTCCCGCTG GCTCGCCCTC
GGGGTGCTCT GCACCAGCAA CCTGATGGCC ATCCTGGACA GCTCGATCGT TACGGTCGCG
CTGCCGACCA TCCAGCAGGA CCTCGGCTTC TCCCAGGCGA ACCTGGCCTG GGTTGTGAAC
GGATACCTGA TCGCCTTTGC TGGCCTGCTG CTGCTGTCCG GGCGGCTGGG TGACCTGCTG
GGCGGCCGGC CCGTCTTCAT CGGGGGGCTC GGCCTGTTCA CGGCAGCCTC GCTGGCCTGC
GGCCTGGCCA ACACCGGCGG CCTCCTGATC ACGTTCCGCT TCCTGCAGGG CGCCGGGGGG
GCGCTGGCCT CCGCGGTGGC ACTCGGCATG ATAGTCACGA TCTTCCCTGA CAGCCGGGAG
CGGGCCAAGG CACTGGCCTG CTACGCCTTC GTCGCCGCGG CCGGCTCATC GATCGGGCTC
ATCCTCGGCG GCGTGCTGAC CAAGAGTCTC AGCTGGCCGT GGGTCTTCTA CGTCAACGTG
CCGCTGGGTG TCCTCGCGGT GGTGCTCGCC CTGTGGGTGC TGCCCCCGAT CGCCGGGCTC
GGGCTGCGCG AGAGCGCGGA CGTTCTCGGC GCCGGGCTGG TGACCGCCGG GCTGATGCTC
GGCGTCTACA CCGTCGTCCG GGGCGGGGCG GACGGCTGGA GCGACGGCGG GACGCTGGGG
TCGCTCGCCG CCTCGCTGCT CCTGCTCGCC GCCTTCGTGG GCCGCCAGGC CAGAGCGGCC
AAGCCACTGC TGCCGCTGCG CATCTTCCGC TCCCGCGCGG TCGGGGGAGC GAACATCATC
CTGACCCTGA TGGTGGCCGG CCTGTTCGGC TACCAGTTCT GCACCGCCCT GTACCTGCAG
GACGTGCTCG GCTACAACGC GCTGCGCACC GGGCTGGCGT TCCTGCCGGC CCCGCTAACC
ATCGCGGCCG TCTCGCTGGG CCTCGCGTCG CCGCTGAACA CCCGGTTCGG CCCCAGGCCG
GTGATCGTCG TCGGGCTGCT GCTGGTCGCC GCGGCGCTCC TACTGTTGGC CCGGCTACCG
GCTGACGGCA GCTACGCGAG CGACATCGCC CCGGTGTTCG TCCTGCTGGG TATCGGTTTC
GGCGCGGCGA TGCCCGCACT GATCGGCCAG GCGATGGCGG TCTCCGACCC CGCCGAGGCC
GGCGTCGCAT CCGGGGTGGC CAACACCACC CAGCAGATCG GCGCCGCGCT CGGCACCGCG
ATCCTGGCCA CCCTTGCCGC CTCCCGCACC GACTCGCTGC TCGACCACGG CAGGAGCACC
ACCACCGCCC TCACCGGCGG GTTCCACCTC GCCTACGCGG TGAGCGCGGC CCTGGTCGCC
GCGGCCGTCC TCGTCGCCCT GTTCGTCCTG CGCCCGCCCG GCCAGTCGCG GGCCGCCGAC
AGCGCACGGA CCGCCGACGC CCACCCAGCC GAGACCGACG ACCCGACGCA GCCGGCGGGG
GTGCCGGCCG CGGGACAGTA A
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| Protein sequence | MTDSTPPAPP PALPSRWLAL GVLCTSNLMA ILDSSIVTVA LPTIQQDLGF SQANLAWVVN
GYLIAFAGLL LLSGRLGDLL GGRPVFIGGL GLFTAASLAC GLANTGGLLI TFRFLQGAGG
ALASAVALGM IVTIFPDSRE RAKALACYAF VAAAGSSIGL ILGGVLTKSL SWPWVFYVNV
PLGVLAVVLA LWVLPPIAGL GLRESADVLG AGLVTAGLML GVYTVVRGGA DGWSDGGTLG
SLAASLLLLA AFVGRQARAA KPLLPLRIFR SRAVGGANII LTLMVAGLFG YQFCTALYLQ
DVLGYNALRT GLAFLPAPLT IAAVSLGLAS PLNTRFGPRP VIVVGLLLVA AALLLLARLP
ADGSYASDIA PVFVLLGIGF GAAMPALIGQ AMAVSDPAEA GVASGVANTT QQIGAALGTA
ILATLAASRT DSLLDHGRST TTALTGGFHL AYAVSAALVA AAVLVALFVL RPPGQSRAAD
SARTADAHPA ETDDPTQPAG VPAAGQ
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