| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1918 |
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| Symbol | |
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| ID | 3906867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2253077 |
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| End bp | 2255311 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637879256 |
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| Product | catalase/peroxidase HPI |
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| Protein accession | YP_481023 |
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| Protein GI | 86740623 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0108605 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.336609 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAGA ACCATGACGC AGTCGTGTAC AACACGAACG CGGAGAACGG CGGTGGCTGC
CCGGTCGCGC ACAGGCGCGC CCCGCACCCC ACCCAGGGCG GCGGAAACCG CGGCTGGTGG
CCGAACCGGC TCAACCTGAA GATCCTCGCC AAGAACCCCG CCGTGGCCAA CCCCCTCGGC
GGGGAGTTCA CCTATGCCGA GGCCTTCCGG ACCCTCGACC TCGCCGCCGT GAAGCAGGAC
ATCGCGGCGG TGCTGACTAC CTCGCAGGCC TGGTGGCCGG CCGACTACGG TCACTACGGC
CCGTTCATCA TCCGGATGGC GTGGCACAGC GCGGGCACCT ACCGCATCAG CGACGGTCGC
GGTGGTGCGG GTGCCGGCCA GCTGCGTTTC GCTCCCCTCA ACAGCTGGCC GGACAACGCG
AACCTCGACA AGGCTCGCCG CCTGCTGTGG CCGGTCAAGA AGAAGTACGG TCAGAAGATC
TCATGGGCCG ATCTGATGAT CCTCGCCGGC AACGTCGCCC TGGAGTCGAT GGGCTTCGAG
ACCTTCGGCT TCGCCGGCGG TCGGGTGGAC GTCTGGGAGC CTGACGAGGA CGTCTACTGG
GGCCCCGAGA CCACCTGGCT CGACGACGAG CGCTACACCG GCGACCGGGA GCTCGAGAAT
CCCCTCGCCG CCGTCCAGAT GGGTCTCATC TACGTCAACC CGGAGGGCCC GAACGGCAAC
CCGGACCCGA TCGCCGCGGC GCGCGACATC CGCGAGACGT TCCGCCGGAT GGCGATGAAC
GACGAGGAGA CGGTCGCCCT GATCGCCGGC GGCCACACCT TCGGCAAGAC CCACGGCGCG
GCCAACCCGG ACGAGCACGT CGGCCCGGAG CCCGAGGGCG CCCCCATCGA GGAGCAGGGC
TTCGGCTGGA CGAGCACCTT CGGCACCGGC AGGGGTGGGG ACACGATCAC CAGCGGGCTT
GAGGGTGCGT GGACGAACAC CCCGGTGAGC TGGGACAACA GCTTCTTCGA GATCCTGTTC
AGCTACGAGT GGGAGCTGAC GAAGAGCCCC GCCGGTGCGA ACCAGTGGAA GCCGAAGGAC
GGTGCCGGTG CCGGCACCGT CCCCGACGCC CACGACGCAG CGAAAAGCCA CGCCCCCACG
ATGCTGACGA CGGACCTCGC CCTCCGGTTC GACCCGATCT ACGAGCCCAT CTCGCGGCGC
TTCCTGGAGA ATCCGAGCGC GTTCGCGGAC GCGTTCGCCC GGGCGTGGTT CAAGCTGACG
CATCGTGACC TGGGGCCGGT CGCGCGCTAC CTCGGCCCGG AGGTCCCGAC CGAGACGCTG
CTGTGGCAGG ACCCGCTCCC GGCGGTGGCC CACGAGCTCA TCGACGCCGC GGACGTCGCC
ACTCTCAAGG GTCAGATCCT TGCCTCGGGC CTGTCGGTCT CCCAGCTGGT CTCCACCGCG
TGGGCGTCGG CCTCGACGTT CCGCGGTGGT GACAAGCGCG GCGGCGCCAA CGGTGCGCGC
ATCCGCCTCG AACCACAGCG CGGTTGGGAG GTCAACGAAC CCGACCAGCT GGCGGCGGTC
CTGCGCACGC TGACGAGAAT CCAGGAGGTC TTCAACGCCG CCCAGACCGG CGGCAAGCAG
GTCTCACTCG CCGACCTGAT CGTGCTCGCC GGTGGTGTTG CCGTCGAGCA GGCCGCCGCG
AACGCCGGCT TCGACGTCGA GGTCCCCTTC GCACCGGGAC GTACCGACGC GTCGCAGGAG
CAGACCGACG TGGAGTCGTT CGCGGTGCTC GAGCCGACGG CGGACGGGTT CCGCAACTAC
CTGGGGAAGG GCCACCGCCT GCCGGCTGAG TACCTTCTGC TCGACCGGGC GAACCAGCTG
ACCCTGAGCG CCCCCGAGCT GACGGTCCTC GTCGGTGGTC TGCGGGTCCT GGGCGCCAAC
TACCAGCAGT CGCCGCTCGG CGTCTTCACC GCGACCCCCG GGTCGCTGAC GAACGACTTC
TTCGTCAACC TGCTCGAGCT GGGCACGACG TGGAAGACGA CGTCCGAGGA CGCGAACACC
TTCGAGGGCC GCGATGCCGC CACGGGCAAG GTCAGGTGGA CCGGCAGCCG CGCCGACCTC
GTCTTCGGTT CAAACTCCGA ACTGCGCGCG CTCGCGGAGG TCTACGCGAG CGACGACGCG
CGGGAGAAGT TCGTGCACGA CTTTGTCGCG GCGTGGGTCA AGGTGATGAA CCTCGACCGG
TTCGACCTCG TCTGA
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| Protein sequence | MSENHDAVVY NTNAENGGGC PVAHRRAPHP TQGGGNRGWW PNRLNLKILA KNPAVANPLG
GEFTYAEAFR TLDLAAVKQD IAAVLTTSQA WWPADYGHYG PFIIRMAWHS AGTYRISDGR
GGAGAGQLRF APLNSWPDNA NLDKARRLLW PVKKKYGQKI SWADLMILAG NVALESMGFE
TFGFAGGRVD VWEPDEDVYW GPETTWLDDE RYTGDRELEN PLAAVQMGLI YVNPEGPNGN
PDPIAAARDI RETFRRMAMN DEETVALIAG GHTFGKTHGA ANPDEHVGPE PEGAPIEEQG
FGWTSTFGTG RGGDTITSGL EGAWTNTPVS WDNSFFEILF SYEWELTKSP AGANQWKPKD
GAGAGTVPDA HDAAKSHAPT MLTTDLALRF DPIYEPISRR FLENPSAFAD AFARAWFKLT
HRDLGPVARY LGPEVPTETL LWQDPLPAVA HELIDAADVA TLKGQILASG LSVSQLVSTA
WASASTFRGG DKRGGANGAR IRLEPQRGWE VNEPDQLAAV LRTLTRIQEV FNAAQTGGKQ
VSLADLIVLA GGVAVEQAAA NAGFDVEVPF APGRTDASQE QTDVESFAVL EPTADGFRNY
LGKGHRLPAE YLLLDRANQL TLSAPELTVL VGGLRVLGAN YQQSPLGVFT ATPGSLTNDF
FVNLLELGTT WKTTSEDANT FEGRDAATGK VRWTGSRADL VFGSNSELRA LAEVYASDDA
REKFVHDFVA AWVKVMNLDR FDLV
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