Gene Francci3_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1909 
Symbol 
ID3906858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp2241855 
End bp2242754 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content76% 
IMG OID637879247 
Producthypothetical protein 
Protein accessionYP_481014 
Protein GI86740614 
COG category[S] Function unknown 
COG ID[COG1912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTGCA TCAGCTTCAC CACTGACTAC GGACTCGCCG ACGGCTTCGT CGCAGCCTGC 
CACGGGGTGA TCCTGCAGAC GGTGCCGGAT GCCCGGATCA TCGACGTGAC CCACCTGGTG
CCGCCGGGGG ACGTGCGGCG GGGGGCGGCC GTGCTCGCCC AGACGGTGGG TTCCCTGCCT
CGGGGGGTGC ACCTCGCCGT GGTGGATCCC GGGGTGGGCA CGTCGCGCCG GGCCCTGGCA
CTGCGCGCGG TCGGCGGTCA CCTGGTCGGG CCGGACAACG GCCTGCTGAT CTCCGCGGCC
GAGCGGCTGG GGGGGATCGA GGCCGCGGTC ACGCTGGAGG TGCGGCCCGC AACCCCCGCG
ACGTTCCACG GCCGGGACGT CTTCGCCCCG GTGGCTGCCG CCCTGGCGCG CGGGACACCG
CTCCAGGAGG TCGGTGAGCC GGTGGAGCCG GCGACCCTGG TCCGTCCCCG GGCGGCCCTG
GCCCGGCTAC GCCCGGATGG GACCGTGGAG ACCGAGGTGG TCCTCGTCGA CACGTTCGGC
AACGTCCAGC TCGCGGCCTC CGGCGCGCTG CTCGGCGCGG CCGGGCTGCG CCCGCCGGGT
CGGGCGGTGC TGCGACCGCT CCGGCGGGAC CGCCTGACCG GGGCCGAGCA GGCGGCCGGC
CCGCTCGCGG CCGCGGGCCC GATGACTGAA CTGGCCGTGG GGGTCACCTT CGGCTCGGTC
GGCCCGGGGG AGGCGGTGCT CTACGTCGAC TCGGCGGGGA TGGCGGCCCT CGCCGTGCGC
GACGGTGACG CCGCGCATGC CCTCACACTT ATGCCCGGCG ACCGCCTTAC GCTGCGCCGC
TGGGACGGGC GTCCGGGACA GGCGTCCCGT GAACAGGCGT CCGGGACAGG CGTCCCGTGA
 
Protein sequence
MRCISFTTDY GLADGFVAAC HGVILQTVPD ARIIDVTHLV PPGDVRRGAA VLAQTVGSLP 
RGVHLAVVDP GVGTSRRALA LRAVGGHLVG PDNGLLISAA ERLGGIEAAV TLEVRPATPA
TFHGRDVFAP VAAALARGTP LQEVGEPVEP ATLVRPRAAL ARLRPDGTVE TEVVLVDTFG
NVQLAASGAL LGAAGLRPPG RAVLRPLRRD RLTGAEQAAG PLAAAGPMTE LAVGVTFGSV
GPGEAVLYVD SAGMAALAVR DGDAAHALTL MPGDRLTLRR WDGRPGQASR EQASGTGVP