Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1907 |
Symbol | |
ID | 3906856 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 2239756 |
End bp | 2241036 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637879245 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_481012 |
Protein GI | 86740612 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.278952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTGCC ACCGTGCTCG TGTGCGCATA GCGGTGATCA CCGAGTCGTT CCTCCCCCAT GTTGACGGGG TGACGAACAC GGTCTGTCGA GTGCTGGAAC ATCTGCGGGA CCGGCAGCAC GAGGCGATGG TCATCGCGCC GGCTCCGGCG CCCGCCGCCC GACGCGCGGC GGCGCGCAGC CACGCCGGCG CACCGGTGCT GTGGGCACCG TCGGCTCCCC TACCGGGTTA CCCGGCGTTT CGCTTCGCAG TCCCGTGGCC CGGGCTTCCC GCCGCCTTAC GGGAGTTCAA CCCGGACATC GTCCATCTGG CGGCGCCCGC CGGCCTCGGG GCGCAGGCGG TGTTCGCGGC GCGGCGCCTC GGCATACCGA GCATCGCCGT CTACCAGACG GACATCGCCG CGTTCGCAGC CCGCTACGGG CTGGCCACCG CGGAACGCAC GATCTGGCAC TGGCTCGCCA TCGTACATCG GCTCGCGGCC CGGACCCTCG CGCCGTCCTG GGATGCCGTC GACACCCTCC TGAGCCAGGG CGTGCAACGG GTCGCCCGCT GGAGTCGGGG GGTGGACCTC GAACGTTTCC ACCCGGCGCA CCGGGACGAC GAGCTGCGCC GCCGCCTCGC TCCGAACGGC GAGGTCCTGG TCGGCTACGT CGGCCGGCTG GCCCGGGAGA AGCGGGTGGA GCTGCTCGGA GCGGTGTCCG ACATCCCGAA CACCCGGCTC GTCGTCGTCG GTGACGGCCC CTCCCGTCCC ACCCTGGCCC GGTCGATGCC GAACGCGGCG TTCCTCGGAT TCCGCGCCGG GCAGGAGCTC TCGGCCGCGG TCGCGAGCCT CGACGTCTTC GTCCACACCG GCATCCACGA GACATTCTGC CAGGCGGCGC AGGAGGCCAA GGCGAGCGGG GTACCGGTGG TCGCCCCTGC GGCGGGCGGG CTGCTTGACG TTGTCGAGCA CGGCCGCACC GGGCTGCACT ACACTCCCGG CGACCCCGCG GCCCTGCGGG CGCAGGTCGC GGCCCTGACC GACGACCTCC CTCGTCGGGT GGCGATGGGT GCGGCGGCCC GGGAGTCGGT CGCGGGATGC GGGTGGAGCG CGATCGGCGA CGAGCTGCTC GGCCACTACC GTGACGTGCT CGGCACCGGC GGCGGGGCCG GTCGCTTCGG CCGCCTCAGG CACCCCGGCC CGGTCATCGA GGGACGGAGC GGACGGCGGG GCGGACGACG GGACGGATGG GACGCACGCA AGCGGCCCGG GACGGGAAAC GACGACGGGT GGTCAGCATG A
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Protein sequence | MPCHRARVRI AVITESFLPH VDGVTNTVCR VLEHLRDRQH EAMVIAPAPA PAARRAAARS HAGAPVLWAP SAPLPGYPAF RFAVPWPGLP AALREFNPDI VHLAAPAGLG AQAVFAARRL GIPSIAVYQT DIAAFAARYG LATAERTIWH WLAIVHRLAA RTLAPSWDAV DTLLSQGVQR VARWSRGVDL ERFHPAHRDD ELRRRLAPNG EVLVGYVGRL AREKRVELLG AVSDIPNTRL VVVGDGPSRP TLARSMPNAA FLGFRAGQEL SAAVASLDVF VHTGIHETFC QAAQEAKASG VPVVAPAAGG LLDVVEHGRT GLHYTPGDPA ALRAQVAALT DDLPRRVAMG AAARESVAGC GWSAIGDELL GHYRDVLGTG GGAGRFGRLR HPGPVIEGRS GRRGGRRDGW DARKRPGTGN DDGWSA
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