| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1864 |
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| Symbol | |
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| ID | 3906139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 2198759 |
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| End bp | 2200399 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637879202 |
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| Product | transposase IS66 |
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| Protein accession | YP_480969 |
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| Protein GI | 86740569 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3436] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.164551 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGTTC TGTCTGTCAC CGATGATGTC ACCGAGGTGG CGTACTGGCG TGGGCGTGCC
GAGCGGGCCG AGGAGTGTGC GGAGAAAGCC GAGGCCCGTG TCGGGCAGCT GCAGCTGCGG
GTCGAGGAGT TGAGCGAGCA GGTCGCGGTG CTGTCCCGGA TGCTGTTCGG TCGTTCCTCG
GAGAAGACCG GCCCGTCGTC GGCTGTGGAT GAGAAACCAG AAGATCGGCA GGATTCGGGC
GGTGGGGATG CCGGCCGGCC GGCGCGTCAA CGCGGGCAGC GGCCGGGGAG CCGGGGGCAT
GGCCGGCGGG ACTACTCGCA TCTGCAGACC CGCGAGGAGA TCCATGATGT GCCCGAGGTC
GACCGTGCCT GCCCCGGGTG TGGGGTGGCG TTCACGCCGT TGGGGACCGA CGACAGCGAA
CAGGTCGACT GGCAGGTCGT GATCACCCGG ATCGTGCATC GGCGGCGGCG GTATCGGCGG
TGCTGCACAT GTCCGGGGCC GCGGACAGTG ACCGCGCCGG TGCCACCCAA ACCGATTCCC
AAGGGCCGGT TCACCGCAGG GTTCCTCGCC CGCCTTCTCT ACGAGAAGTA CGTCCTGGGC
CTGCCGTTGC ACCGGATCGC TCGGGCGCTG GCCGCCGACG GGCTCGGTGT TGCCGAGGGC
ACTCTGTGTG GGGCGTTGAA GGACGTGCAT GGACTGCTCG GCGGGCTCGA TGAGCAGATC
GTGGCGCGTA ACGCCGCCGC CGGTCATGTC CACGCGGACG AGACGACGTG GCGGGTGTTC
GAGCGGGTCG AGGGCAAGGA CGGGACCCGC TGGTGGCTGT GGGTGTTCGT CGCCGCCGAC
ACGGTGGTGT TCCGGATGGA CCCGACCCGC TCGGCTGCCC CGGTCGAGAA GCACTTCGGG
ATCGACCGGG CCGCCGGGGC GCTGTCCGAC GGACGTCGCC TCGTCGTCTC GTCGGACTTC
TACACCGTCT ACCAGTCCCT GGGCCGCGTC GACGGAGTCG ACCCGCTCTG GTGCTGGGCA
CACATCCGCC GGTACTTCAT CCGGGCCGGG GACGCCCACC CCCAACTGCG GTACTGGGCC
GACCAGTGGG TCGCCCGGAT CGGGATGCTC TACCTCGCTC ACCGCGCCCT CGCCGCCGAG
CAGCCCACAA CCGGCGGCTA CCGCGAGGCC GCCGGCGCGT TCGAGGCCGC GCTGAGGGCG
ATCGACACGG CGCGGCGCGC GGAGGCGGCG ATCCACAGCC TGCACCCGGC GGCGAAGAAG
GTCCTGGCGA CCCTGGACCG GGAATGGGAC GGGCTGGCCC GCCACCAGGA CTTCCCCGAC
CTGGATCTTG ACAACAATGC TGCCGAGAGA GCGCTACGGA CCCCGGTCGT CGGGCGGAAG
AACTACTACG GCGCACACGC TGAGTGGGCC GCGCACCTCG CCGCCCGGGT CTGGACCATC
GTCGCCACCG CGGAGCGTAA CGGCCGTGAA CCCCTCGCGT TCCTGACCGG CTACCTGAAC
GCCTGCGCCA CAGCCGGCGG GAAAGCACCC GCCGGCCCCG CCCTCGAACC CTTCCTCACC
TGGCAGACCA CCACCCAGAC CGGCAGCCCT CCCAGCACCG ACCCACCCCA GGACGGCCCA
CCCGACGGGC CCGAGCCCTA A
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| Protein sequence | MSVLSVTDDV TEVAYWRGRA ERAEECAEKA EARVGQLQLR VEELSEQVAV LSRMLFGRSS
EKTGPSSAVD EKPEDRQDSG GGDAGRPARQ RGQRPGSRGH GRRDYSHLQT REEIHDVPEV
DRACPGCGVA FTPLGTDDSE QVDWQVVITR IVHRRRRYRR CCTCPGPRTV TAPVPPKPIP
KGRFTAGFLA RLLYEKYVLG LPLHRIARAL AADGLGVAEG TLCGALKDVH GLLGGLDEQI
VARNAAAGHV HADETTWRVF ERVEGKDGTR WWLWVFVAAD TVVFRMDPTR SAAPVEKHFG
IDRAAGALSD GRRLVVSSDF YTVYQSLGRV DGVDPLWCWA HIRRYFIRAG DAHPQLRYWA
DQWVARIGML YLAHRALAAE QPTTGGYREA AGAFEAALRA IDTARRAEAA IHSLHPAAKK
VLATLDREWD GLARHQDFPD LDLDNNAAER ALRTPVVGRK NYYGAHAEWA AHLAARVWTI
VATAERNGRE PLAFLTGYLN ACATAGGKAP AGPALEPFLT WQTTTQTGSP PSTDPPQDGP
PDGPEP
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