| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1602 |
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| Symbol | |
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| ID | 3903737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | - |
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| Start bp | 1922655 |
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| End bp | 1924391 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637878939 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_480707 |
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| Protein GI | 86740307 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.484756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGCACG CGACATTGCT GCCGGAAGTC CTACAGAACC GCGCCGCCCG CCAGCCGGCC
AGGCGGGCCT ACGTGTTCGT GGATGAACAC GAGGCGGAAA AGGCGGTACT GACGTACGGC
GACCTGCACG CGCGGGCGCT CGCCGTGGCC GGGGAGCTGA TCCGGCGCTG CCGGCCCGGC
GACCGGGCGC TGCTGCTCTT CCCGCCGGGT CTGGATTTCA TCGTCGCCTA CTTCGGCTGC
CTCTACGCGC AGGTGATCGC GGTCCCCGTC AACCCCCCGC GCAGGAACCT GATCCAGGAC
GCGACCCGGA GCATCATCAA GGACTGCGAG CCTTCGGCCG TGCTCACCGT CGGCGCGATG
GTCGAGCACA TCAGGCCCGT CGTGGAATCG ATCCGTGGCC CCCTCCCCTG GCTGCCGGTC
GACCAGGTGG CGGACGAGAC GAACGAGACG GACCAGGCGG GCACGAGCTT CCGCCCCCGG
CCCTGTCCGC CGGATTCCGT CGCCTTCCTT CAGTACACCT CCGGTTCCAC GTCCGATCCG
AAGGGGGTCA TGGTCTCCCA CCGGAACCTC GCCGCGAACC AGGAGATGAT CCGGCGCGCG
TTCGACCACG ATCAGGACTC GACGTTCGTC GGCTGGGCAC CGTTCTTCCA TGACCAGGGG
CTGATCGGCA ACATCCTGCA GCCGCTCTAC CTCGGGGCGA CCAGCATCCT CATGGCGCCG
ATGACGTTCA TCCGGTGGCC CCTGCGCTGG CTGTCGGCCA TCTCCCGGTA CCGGGCCCAC
ACCAGCGGCG GGCCCAACTT CGCCTTCGAT GTCTGCGTCG CACGGGCCGC CCGGGGGGAT
GTGCCGGACC TCGACCTCAG CTGTTGGAAG GTCGCGTTCA ACGGGGCCGA GCCCATCCGT
CACGAGACCC TGCGCCGGTT CTCGGCGATC TTCGCGCCCC ACGGGTTCGA CGAGAAGGCG
TTCTACCCGT GCTACGGCCT GGCCGAGGCG ACCCTGCTCG TGACCGGCAG CCGGAAGGGC
CGCGGTCCCC GCGCCCTCGA GGCGGACGTC GAGGCGCTCG GTCACCGGCG CTATGTGCCG
GCATCGGGCG GACGCGGCCG GAGTCTCGTC GGATCCGGGC TCGTCCTCCC GGAGGAGGAG
CTCCGGATAG TGGACCCCGA AACGGGACGC CCGTGCCCCG CGGACGAGGT GGGCGAGATC
TGGGTCTCCG GCGACCAGGT GGCGCAGGGA TACTGGCGCC GCCCGGAGGC GACGGCCGAG
GTGTTCCACG CCGAGTTCGA CGGCGAGACC GGCCGGGCTT ACCTGCGCAC CGGCGATCTC
GGCCTGCTGG TCGACGGCGA GGTCTACGTC GTGGGCAGGC TGAAGGACCT GGTGATCATT
CGGGGCCGGA ACTACTATCC CCACGACATC GAGCTCACCG TCCAGTCGGC CCACCCCGCG
TTGCGCCCCG GCGGGTGCGC CGCGTTCTCG GTTCCCGGTG CCGACAGCGA GAAGCTGGTC
GTCGTGCAGG AGATCAGGGA CGAGCAGCGC CTCACCGCCG ACGCGAGGGA CGTCGCTGCG
TCGATCCGGG CGGCGGTGAC GCGGGAACAC GACCTCTCGG TGAACGACCT CGTGCTGGCC
CTGCCGGGCC GGCTACAGAA GACCAGCAGC GGCAAGATCA TGCGAGCCGC GGCCAGGAAC
CGCTACCTGG CGGCCGGGTT CGAGATCTGG GAACCGGGGA TGTCCTCCGT CGCCTGA
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| Protein sequence | MPHATLLPEV LQNRAARQPA RRAYVFVDEH EAEKAVLTYG DLHARALAVA GELIRRCRPG
DRALLLFPPG LDFIVAYFGC LYAQVIAVPV NPPRRNLIQD ATRSIIKDCE PSAVLTVGAM
VEHIRPVVES IRGPLPWLPV DQVADETNET DQAGTSFRPR PCPPDSVAFL QYTSGSTSDP
KGVMVSHRNL AANQEMIRRA FDHDQDSTFV GWAPFFHDQG LIGNILQPLY LGATSILMAP
MTFIRWPLRW LSAISRYRAH TSGGPNFAFD VCVARAARGD VPDLDLSCWK VAFNGAEPIR
HETLRRFSAI FAPHGFDEKA FYPCYGLAEA TLLVTGSRKG RGPRALEADV EALGHRRYVP
ASGGRGRSLV GSGLVLPEEE LRIVDPETGR PCPADEVGEI WVSGDQVAQG YWRRPEATAE
VFHAEFDGET GRAYLRTGDL GLLVDGEVYV VGRLKDLVII RGRNYYPHDI ELTVQSAHPA
LRPGGCAAFS VPGADSEKLV VVQEIRDEQR LTADARDVAA SIRAAVTREH DLSVNDLVLA
LPGRLQKTSS GKIMRAAARN RYLAAGFEIW EPGMSSVA
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