Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1565 |
Symbol | |
ID | 3904797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | + |
Start bp | 1877388 |
End bp | 1878578 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637878902 |
Product | methyltransferase type 12 |
Protein accession | YP_480670 |
Protein GI | 86740270 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.663655 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.440278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGACC AGTCCACCGC CTGCCCCGCC TGCGGCGGTT CCCGTCTCAC CTCCGTCTAT ACAAAGGACG ACGTCCCGTC GCACAGTTGT CTGCTGCTGG CCGACGAGGA CGAGGCCCGG GCGTTCCCGA AGGGTGATCT GCGGATCGCC TTCTGCGAGC GCTGCGGCTT CATCATGAAC ACGGCCTTCG ATCCGACCAA GAATCAGTAC TCCGCCCGGT ACGAGGAGAC GCAGGCATTC TCCACCCGAT TTCAGGAGTT CGCGCGGGAC CTCGCCAAGC GCTGGACCGA CAAGTACGAT CTGTACGGGA AGACGGTCCT GGAGATCGGG TGCGGCAAGG GTGAGTTTCT CGTCCACCTG GTGGAGCAGG GTGCCGGCGC CGGCATCGGG ATCGACCCGG GTGTCCGGCC CGAGCGCATC ACCAGCCCGG TTGCCGGCCG GCTGACCTGG ATCACGGACC TCTACTCCGA GCGGTATGCG CACCTGACCG CCGATGCCGT CGTGTGCCGG CACACCCTGG AGCACATCGC GCCGGTCGGC GACTTCATGC GGATGATCCG GGCCGCGCTC GGTGACCGGA CCGATATCCC GGTCCTCTTT GAGCTGCCGG ACGTCCTGCG GGTGCTGCAG GAGGCGGCGT TCTGGGATGT GTACTACGAG CACTGCTCCT ATTTCAGCGC CGGTTCGCTG GCGAGGTTGT TCCGAGCTAC CGGGTTCGAG GTGCTCGACG TCTCCCTCGA CTATGACGAT CAGTACCTGC TGATCGAGGC GCGGCCGTCC ACCGTTCCGG CGGCCGGTGA CCCGCTGCCG ATCGAGGACG ACCTGGCCAC CCTGCGCGTC GGGGTACGGC ACTTCCAGCG TGAGGTGGCC ACGACGCTGA ACCGGTGGAG CGAGATGCTG TGGCGCGGGC ACCAGCGCGG CGAAAAGGCG GCGATCTGGG GTTCGGGCTC CAAAGGTGTG TCGTTTCTGG CGACCCTCGG CCCGGCCGCC GACCTGGTCC GCTACGCCGT CGACATCAAC CCGCACAAAC ACGGCATGTT CATGGCGGGC AGCGGCCACC GTATCGTCCC GTCCGAGTGG CTGCGGGAAG ATAGGCCGGA TCTTCTGATC ATCATGAATC CGATCTATCG TGACGAGATC GCGGGGGAGT TGACCCGGCT GGGCGTCGAC ACCGAGCTGA GGGCCGTCTG A
|
Protein sequence | MTDQSTACPA CGGSRLTSVY TKDDVPSHSC LLLADEDEAR AFPKGDLRIA FCERCGFIMN TAFDPTKNQY SARYEETQAF STRFQEFARD LAKRWTDKYD LYGKTVLEIG CGKGEFLVHL VEQGAGAGIG IDPGVRPERI TSPVAGRLTW ITDLYSERYA HLTADAVVCR HTLEHIAPVG DFMRMIRAAL GDRTDIPVLF ELPDVLRVLQ EAAFWDVYYE HCSYFSAGSL ARLFRATGFE VLDVSLDYDD QYLLIEARPS TVPAAGDPLP IEDDLATLRV GVRHFQREVA TTLNRWSEML WRGHQRGEKA AIWGSGSKGV SFLATLGPAA DLVRYAVDIN PHKHGMFMAG SGHRIVPSEW LREDRPDLLI IMNPIYRDEI AGELTRLGVD TELRAV
|
| |