| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1554 |
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| Symbol | |
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| ID | 3904786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1863193 |
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| End bp | 1865025 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637878891 |
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| Product | major facilitator transporter |
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| Protein accession | YP_480659 |
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| Protein GI | 86740259 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2223] Nitrate/nitrite transporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.30485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACTT CCGACACCGC CGCCGGCACC CTGTCGCTTG AGGCCGACGA GGTCCTGGCC
CGGCCCGGTC CGGACAACTA CAAGTGGATC GCGCTGTCGA ACGCGACCAT TGGCATCCTG
ATGGTGACGA TCAACAGTTC GATTCTTCTC ATCGCCCTTC CGGATATCTT CCGGGGAATC
GAGATAGACC CGCTCGCACC GGAGAACACC TCGTACTTCC TCTGGATCCT GATGGGATTC
CTGCTGGTCA CCTCGGTGCT CGTGGTGAGT CTGGGGCGGG TCGGCGACAT GTTCGGCCGG
GTGCGGATGT ACAACCTCGG CTTCGCGATC TTCACGCTGT TCTCGATCCT GCTCGCCGTC
ACCTGGATGC ATGGCACGGC AGCCGCCTGG TGGATCATCA TCATGCGGGT GCTGCAGGGC
GTGGGCGGTG CCTTCCTCTT CGCCAACTCC AGCGCGATCA TCACTGACGC CTTCCCGGAG
GACGAACGCG GGCTCGCCCT GGGGGTCAAC GGCGTCGCGG CGATCGTCGG ATCATTTCTG
GGGCTGTTGA TCGGCGGTCT GCTGGCGCCG GTCGAATGGC ATCTGGTCTT TCTTGTCTCG
GTGCCGTTCG GCATCTTCGG GACGGTCTGG GCCTACCTGA AGCTGCGCGA CAACGGGGCG
CGCACCCAGG CCCGGATCGA CTGGGCCGGC AACATCACGT TCGCGGTCGG CCTCATCGCG
ATCCTGACCG GCATCGTCTA CGGGCTGCAG CCCTATGGCG GTCACACGAT GGGCTGGACC
AAGCCGTTCG TGCTGAGCTG CCTGTTCGGT GGTCTCGCGG TGCTGATCGG CTTCGTCGTC
ATCGAGCTGC GCTCCGCCGA CCCGATGTTC CGCCTGGACC TGTTCCGGAG CCGGACCTTC
ACCATGGGCA GCATCGCGGC TCTGCTCGGC GCGCTCGCCC GTGGTGGTCT GCAGTTCATG
TTGATTATCT GGTTGCAGGG GATCTGGTTG CCGCTGCATG GCTACAGCTT CGAGAAGACC
CCGCTGTGGG CCGGCATCTA CCTGATTCCG GTGACCGTCG GATTCCTGGT GGCGGGGCCG
CTGGCCGGCC GGTTCGCGGA CCGCTACGGT GCGCGTCCGT TCGCCACCCT GGGACTGGTG
ATCACGGCGG TGGCGTTCCT GCTGTTCGAC GCCATTCCCA TCGACTTCGA CTATCCGTGG
TTCGCGCTGA TCCTGTTGCT GATGGGCCTG TCCATGGGCC TGTTCGCGGG GCCGAACACC
AGCAGCGTGA TGAACACCCT GCCGCCCAAC CAGCGCGGTG CCGGTGCCGG CATGCTCAAC
ACGTTCCAGA ACTCGGCCAG CGTGCTGTCC ATCGGTGTTT TCTTCACCAT CATCGCGCTC
GGGCTGGCCG CCAGCCTTCC GGACGCCATG TACTCCGGGC TTGTCGGGCA GGGCGTCTCC
CCGGCGAAGG CGCACGAGCT GGCGAACCTG CCGCCGATCG GCAGCCTGTT CGCCGCGTTC
CTCGGGTACA ACCCCACCGA GCGACTGCTC GGCCCGGACA CCCTGTCGCA GCTCGACCCG
GCGAAGGCCG ACTTCCTCAC CGGGCACACC TTCTTCCCGA ACCTCATCTC CGGGCCGTTC
GGTGACGGTC TGCGCCTCGC CTTCGCCTTC GCCGCCGTCG CCTGCCTGGT CGCCGCGGGC
TTCTCCTGGC TGCGCGGGAA GCAGCGGCCG CACGTGCGCC GTCCGCTGCT CGAAGAGACG
GCCGAGGGGC TGGCCGGCGC GGGCGACATC GCGGCGATGG AGGACGGTGC CGGGAGCGCT
CTTTCGAGCA GCCCCCTGGC CGCCGAGCGA TAG
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| Protein sequence | MTTSDTAAGT LSLEADEVLA RPGPDNYKWI ALSNATIGIL MVTINSSILL IALPDIFRGI
EIDPLAPENT SYFLWILMGF LLVTSVLVVS LGRVGDMFGR VRMYNLGFAI FTLFSILLAV
TWMHGTAAAW WIIIMRVLQG VGGAFLFANS SAIITDAFPE DERGLALGVN GVAAIVGSFL
GLLIGGLLAP VEWHLVFLVS VPFGIFGTVW AYLKLRDNGA RTQARIDWAG NITFAVGLIA
ILTGIVYGLQ PYGGHTMGWT KPFVLSCLFG GLAVLIGFVV IELRSADPMF RLDLFRSRTF
TMGSIAALLG ALARGGLQFM LIIWLQGIWL PLHGYSFEKT PLWAGIYLIP VTVGFLVAGP
LAGRFADRYG ARPFATLGLV ITAVAFLLFD AIPIDFDYPW FALILLLMGL SMGLFAGPNT
SSVMNTLPPN QRGAGAGMLN TFQNSASVLS IGVFFTIIAL GLAASLPDAM YSGLVGQGVS
PAKAHELANL PPIGSLFAAF LGYNPTERLL GPDTLSQLDP AKADFLTGHT FFPNLISGPF
GDGLRLAFAF AAVACLVAAG FSWLRGKQRP HVRRPLLEET AEGLAGAGDI AAMEDGAGSA
LSSSPLAAER
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