| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Francci3_1535 |
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| Symbol | |
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| ID | 3905001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. CcI3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007777 |
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| Strand | + |
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| Start bp | 1840147 |
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| End bp | 1843989 |
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| Gene Length | 3843 bp |
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| Protein Length | 1280 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 637878872 |
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| Product | ATPase |
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| Protein accession | YP_480640 |
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| Protein GI | 86740240 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2251] Predicted nuclease (RecB family) |
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| TIGRFAM ID | [TIGR03491] RecB family nuclease, putative, TM0106 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACAGGT TCGAGGACCG CTGGGTGGTT TCCGCCAGTG ATCTTGTCGA CGTCGTCGAG
TGTGGGCATC GCGTCGGGCT TGCGCACGCG CTCGCCGCCG GGCTGGTGAC CGGGGAGACG
TCGGAGAACG GGCCGCGCCG GATCGACCGG GTGCGCCTGA CCCCCGCGGA CACCACTGCC
GTGCGGCACG GCGAGGCGCA CGAACGACGC TGGCTGGAGC ATCTGCGCCG GTGTTTTGGC
GCGGACGGGG TCGTGGCGAT CGAGCGGCCC GCCCCCACGC TCGCCGCCCT GGCCCAGGCC
CACGAGCGGA CCCGCCAGGC GTTGGCCGCC GGGGTTCCCG TCGTCTACCA GGGGGCGCTG
TTCGACGGCG CGTTCCAGGG GCGCCCCGAC TTCCTCATCG CGGCGCATCT CGACCCGGTC
GCCGGCGCAT CGACCGGGCC CGCGGTCGCG GGCCGTTACG AGCCCTACGA CGCCAAGCTC
GCCCGGCACG CCAGTCCGGG AGCCGTGCTG CAGCTCGCCG CCTACGCGGC GGCCTTACCG
TCGGTGGGCG TACCCGTTCC GCGGTTCATG CATCTGCTGC ATCCCGCGCA GCGGGCCACC
GCTCCAGAGC CAGAGCCAGA GCCCGCGCTC GGGGTCGGGG TCGGGGTCGG GGTCGTGCGC
ACGTTCCGGG TCGACGATGT CGTGCCGATG GTCGGGCACG CGCGCAGCCG TCTCGCCGAT
CGGCTGGCGG CTGCCCCCGC GGTTCCCGAA CCGTCCTGGG CCGAGCCCCG GTCGGCCTGC
GCCACCTGCG CGTTCAGCGC GCACTGCGCG CGCGGCCGGG CGGAGGCCCG CGACCTGTCG
CTGGTCGCCG GGCTGCGCGG CGACCAGCGA CAGGTGCTGC GCGCGGCCGG CATCACCGCG
GTGGAGGAGC TCGCCGCGGC CCGCGACGAC CAGCGGCCCG CGACGATGTC CCCGGCGACG
TTCGCGGGAC TGCGTCTTCA GGCGGAACTG CAGGCCGGGC AGGATGCGAC GCGTACCGCG
GACGACCCGG TCGGGACGGT GACCGTCCGG ATGACCGGCC CGGAGGGTCT CGCGGCCCTT
CCGGTGCCCG ATCCCGGTGA CATCTACTTC GATATGGAGG GCGATCCGTA CGCGCTGGAC
GCCGCCGGTC TGGAGTACCT GTTCGGCGCG GTCACCCTCG CGGACGGCGA GCTCTTCCGG
GCGTTCTGGG CACACGATCG GGCGGGGGAG CGGCAGGCGT TCGAGCGTTT CGTCGACTGG
GCGACGGAGC GGTTGCGCGC GCACCCCGGC GCGCACATCT ACCATTACGC GCCCTACGAG
CCGAACGCGT TGCGCCGGCT GGCCGCGCGA CACGGCACGC GGGAACGGCA GGTAGACGAT
CTGCTCGCCG GGCACCGGCT GGTGGATCTC TACGCCGTGG TCCGGCGCAG CCTGCGGATC
TCCCAGCCGT CCTACTCGAT CAAATACCTC GAACCGCTGT TCCTGCCCGG TGCCCGACAG
GCCGAGGTGA AGAACGCCAC CGACAGCATC GTGGCGTACG AGAGCTTCCT GGCACACCGC
GCCGCCGGGG AGCTCGCCGC GGCCGACCGC GTCCTCGCTC AGATCGCCGA CTACAACCGG
ATCGACTGCG TGTCGACCCA CCGACTGCAC CGCTGGCTAC TGGGCCTGCG GGGGGCCGAC
GGCGGCACGC CGCGGATCGA CACCGCTGCC GCCGTTGACA CCGCTGCCGC CGTTGACACC
GCTGCCGCCG TTGACACCGC TGCCGCCGTT GACACCGCTG CCGACGCCGC CGACGACGCG
CTCGTCGACG CCGCCGACGA CGCGCTCGTC GACGCCGCCG ACGACGCGCT CGTCGACGCC
GCCGACGACG CGCTCGTCGA CACCCTCGTC GCGGGCCTTC CCGACGATCC GGCCGACTGG
ACGGGAGACG AGCGGGCGCG CGCCCTGCTC GCCGCGGCCG TCGGATACCA CCGGCGTGAG
AACAAGCCCG CCTGGTGGTC GTACTTCGCG GCGCTGACCG CCGATCGCGC CACGCTGGAA
TCGGCCGACG ACTGCGCGGT CCCGGTGAGC TGGACCGTTG TCGAGGACTG GGTCGAACCG
GCCGGGCGAC GGCGGCGGAG TCGTCGACTG CTGCAGGCCC GCGTCGATCC GGACCGTCCG
CATCCCTTCG ACCGCGGCGA GGCGGTGCGG CTGCTCTACC CGGGACCGCC CGGGGCCGAG
GGCGCCACCA CCGACGCGGT CGTCGAGCGA GCCGAGCCGC ACACGCTGCT GCTGCGGGAG
AGCGTCGCCC CCGACGGCGT GGCCCGCAGG CCGCCCCTCG CCGTGCTGCC CGGATCGCCG
GTGCGTCCGG AACCCAAGCC GGCGGCGATC CGCGGCCTCG CCCGCCGGAC CGCCGACGCC
CTGCCGGACC TGCCCGCGGA CCCCGCGTTG GACCTGCTGC GACGTCGCCC CCCGCGGCTG
GTCGGCCGGG ACGACCTGCC GGCGCCCGGC GAGCACGACG GAGACCAGAT CGCCGCCGTG
CTCGCCGCGG TGAGCATGCT CGACGGCTCC TACCTGGCCG TGCAGGGGCC GCCGGGGGCG
GGCAAGACCT ACCTCGCCGG CAGGCTCATC CGCCATCTCG TCGAGCAGGG GCGCACGGTC
GGGGTCTGCT CGACCAGTCA CAAGGCGATC GAGAACGCGA TGCTCGCCGC GACCGGCCAG
CCGCCGGCGG ACCCGAAGCC CGCGGACGCC CGGGCCGCGG ACGCCCGGGC CGCGGACGCC
CGGGCCGCGG ACGCCCGGGC CGCGGACGCC GTGCCCGCCT GGCGCCCCGC GGTGCCCGCC
GCGAAGAAAC AGCGGTCCGG GGCGAGGCCG GCTTCGGCGG CTTCGGGCAT GTTCCCGCCC
TGGGATGGTC CGCGGGATCT GCGGGCACTC GCGGCGTGGC GCCGGGAGCA CCCCGAGGGC
CACCTGGTCG GGGACACCGC CTGGGCGTTC GCGAACCCGG TGCTGCGTGG TGACCCCTTC
GACGTTCTGA TCATCGACGA GGCGGGGCAG TTCGCGCTCG CGGACACCCT CGCGGTGGCT
GGCGCGGCCC GCAACCTCGT GCTCCTCGGC GATCCGCAGC AACTGCCGCA GGTGGTGGCC
GGCATCCATC CGGACGGCGC GGACGCATCG GCGCTGTCGC ATCTGCTCGG CGACGCCGAG
GTGATCCCGC CCGAGTTCGG CTACTTCCTC GACCGGACCC GCCGGCTGCA CCCGGCCGTG
TGCGCGCCGG TGTCGGCGCT GGCGTACCGG GGGCTGCTGC ACGCGCATCC GGTGGCCGGG
ACGCGCGCCG TGGCGGGTGT GCCGGCCGGG CTGTACCTGC ACGACGTCGA GCATCACGAC
AACGGCACCC GGTCGGACGA GGAGGTGGCC GTGATCCGTG ACATCGTTCG CCACCTGCTC
GGTCGTACCC TCGTCGACGG CGGGCCCCCG CGCCCGCTCC TCGGCAGTGA CCTGCTCGTC
GTCGCCCCCT ACAACCGGCA GGTGCGGGCG GTCGAGCACG CGCTGGGCAA GGCGGGCCTG
CCCGGGGTGC GGGTCGGGAC GGTGGACCGT TTCCAGGGCC AGGAGGCAGC CGTCGTCATC
ACCTCGCTCA CCACGTCCAG CTCGGCCCAG GCGCCGCGGG GGCTGGACTT CCTGCTCTCC
CGCAACCGGC TCAACGTCGC GATCTCCCGG GCCCAGGTGG CGGCGGCGCT GGTCATGTCA
CCGGCGCTGC TCGACAGCTC TCCCCGTTCG GTCGCCGAAC TTCAGCTCCT CGCCGGGTTA
GCCCGGCTGC GTGTCATGGC CCGAACGGAC CTGCTCGCCG TGCGCTCCCC GATACATTCC
TGA
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| Protein sequence | MHRFEDRWVV SASDLVDVVE CGHRVGLAHA LAAGLVTGET SENGPRRIDR VRLTPADTTA
VRHGEAHERR WLEHLRRCFG ADGVVAIERP APTLAALAQA HERTRQALAA GVPVVYQGAL
FDGAFQGRPD FLIAAHLDPV AGASTGPAVA GRYEPYDAKL ARHASPGAVL QLAAYAAALP
SVGVPVPRFM HLLHPAQRAT APEPEPEPAL GVGVGVGVVR TFRVDDVVPM VGHARSRLAD
RLAAAPAVPE PSWAEPRSAC ATCAFSAHCA RGRAEARDLS LVAGLRGDQR QVLRAAGITA
VEELAAARDD QRPATMSPAT FAGLRLQAEL QAGQDATRTA DDPVGTVTVR MTGPEGLAAL
PVPDPGDIYF DMEGDPYALD AAGLEYLFGA VTLADGELFR AFWAHDRAGE RQAFERFVDW
ATERLRAHPG AHIYHYAPYE PNALRRLAAR HGTRERQVDD LLAGHRLVDL YAVVRRSLRI
SQPSYSIKYL EPLFLPGARQ AEVKNATDSI VAYESFLAHR AAGELAAADR VLAQIADYNR
IDCVSTHRLH RWLLGLRGAD GGTPRIDTAA AVDTAAAVDT AAAVDTAAAV DTAADAADDA
LVDAADDALV DAADDALVDA ADDALVDTLV AGLPDDPADW TGDERARALL AAAVGYHRRE
NKPAWWSYFA ALTADRATLE SADDCAVPVS WTVVEDWVEP AGRRRRSRRL LQARVDPDRP
HPFDRGEAVR LLYPGPPGAE GATTDAVVER AEPHTLLLRE SVAPDGVARR PPLAVLPGSP
VRPEPKPAAI RGLARRTADA LPDLPADPAL DLLRRRPPRL VGRDDLPAPG EHDGDQIAAV
LAAVSMLDGS YLAVQGPPGA GKTYLAGRLI RHLVEQGRTV GVCSTSHKAI ENAMLAATGQ
PPADPKPADA RAADARAADA RAADARAADA VPAWRPAVPA AKKQRSGARP ASAASGMFPP
WDGPRDLRAL AAWRREHPEG HLVGDTAWAF ANPVLRGDPF DVLIIDEAGQ FALADTLAVA
GAARNLVLLG DPQQLPQVVA GIHPDGADAS ALSHLLGDAE VIPPEFGYFL DRTRRLHPAV
CAPVSALAYR GLLHAHPVAG TRAVAGVPAG LYLHDVEHHD NGTRSDEEVA VIRDIVRHLL
GRTLVDGGPP RPLLGSDLLV VAPYNRQVRA VEHALGKAGL PGVRVGTVDR FQGQEAAVVI
TSLTTSSSAQ APRGLDFLLS RNRLNVAISR AQVAAALVMS PALLDSSPRS VAELQLLAGL
ARLRVMARTD LLAVRSPIHS
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