Gene Francci3_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_1496 
Symbol 
ID3903133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1790509 
End bp1791051 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content71% 
IMG OID637878833 
Productpyridoxamine 5'-phosphate oxidase-related, FMN-binding 
Protein accessionYP_480601 
Protein GI86740201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAGT TTTCATGTCA CGATGGCGCG GTGACGACAT CCTGGCGCGA CTTCGAGGCC 
GCGCAACCCG CCCTCGCCAA GACCGCGCGC ACCCGGTTCG CGGCATTCCG CCATCACATC
CTGGCTACCG TGCGTGCCGA CGGCTCCCCG CGCACGAGCG GAATCGAGAC GAACTTCCGG
TTCGGGGAGC TGTGGCTCGG GAGCATGCCG GATGCGCGCA AGTCCCGGGA CCTGCGTCGC
GACCCCCGCT TCGCCCTGGC CGCCAATCCC GGGCCGGGCC AGGACCTGGC CGGCGGCGAC
ATCCGCGTCT CCGGGCGGGC CCGGTGGATC AACGATGAGG AGGTCCTGGC CTCCTTCGCC
ACCGAGGTCG GCCCGCCGAC GCCGTTCGAC CTCTTCCGCG TCGAGCTCAC CGAGGTGGTC
CGCACGAGCG TCGACGAGCC GGCCGGGGAG ATCGTGCTGG AAAGCTGGCG ACCGGGCTAT
CGAGGGGTGC GGGTGCAGCG CCGTGGCAAC GGGCCGGTGC GCGAAACCTG GGCCGAGGAG
TAG
 
Protein sequence
MAEFSCHDGA VTTSWRDFEA AQPALAKTAR TRFAAFRHHI LATVRADGSP RTSGIETNFR 
FGELWLGSMP DARKSRDLRR DPRFALAANP GPGQDLAGGD IRVSGRARWI NDEEVLASFA
TEVGPPTPFD LFRVELTEVV RTSVDEPAGE IVLESWRPGY RGVRVQRRGN GPVRETWAEE