Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Francci3_1387 |
Symbol | |
ID | 3903368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. CcI3 |
Kingdom | Bacteria |
Replicon accession | NC_007777 |
Strand | - |
Start bp | 1666755 |
End bp | 1668266 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637878724 |
Product | amine oxidase |
Protein accession | YP_480493 |
Protein GI | 86740093 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.600466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00651843 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCGCACGG TGACCGGAGC GACGGATCAC GTCGTCATCG TCGGGGCCGG TCTCGCCGGT CTGTCGGTCG CGCTGCGCCT GGTCGGAGCC GGCCGGCGGG TGACGGTGCT CGAGCGGGAT GCGACCCCCG GCGGTCGGGC CGGCCTGCTC GCACTGGGCG ACTATCGTTT CGACACCGGA CCGACCGTCC TGACCATGCC CGAGCTGATT GCCGACGCCC TGGACTGTGT CGGGGAGGAT CTCGACCGCT GGCTGTCACT GACCCGGCTC GACCCGATGT ACCGGGGGTT CTTCGCCGAC GGTTCGTCGC TGGACATCCG CGCCGACCCC GCCGACACCG CACAGGAGAT CCGGGCGCTG TGCGGCCCGG CGGAGGCGGC CGGCTTCGAG CGGTTCGTCG GAATCGTCAC TGCAATGTTC CGCACCCAGC TGCGCCACTT CATCGACGCG CAGGTCGACT CCCCGCTGTC GTTGCTGCGC CCGCAGCTCG CCCGGCTGGC CGCCCTCGGC GGCTTCCGCC GGCTCGACAC CGTCGTCGGC CGCCATCTAC GGGACCCGCG GACCCGGCGG ATGTTCTCCT TCCAGGCGAT GTACGCCGGG CTCGCCCCGC ACGACGCACT GGCCCTCTAT GCCGTCATCT CCTACATGGA CTGCGTCGCC GGGGTCTACC ACCCGGCCGG CGGCATGCAC GCCGTCGCCG AGGCGCTGGC CGGCGCCGCG GCCAAACACG GTGCCACCCT GCGCTACGAG ACCACGGTGA CGCGGGTGGA GGTGCGGGGC GGCCGGGCGG TCGCGGTGCA CACCGCGGCG GGGGAGCGCA TCGGCGCCGA CGTGGTGGTG CTCAACCCCG ACCTGCCGAT CGCCTACACC GAACTGCTGC CTCCCTCGAC GGCGCCGGCC CGCCTGCGCC GCCTGCGGTA CTCGCCCTCG TGCTTCCTCC TGCTGGCTGG GGCGCGCGTG GAGTACCCGC ACACCGCGCA TCACACCATC CACTTCGGCC GGGCCTGGCG GTCGACCTTC CGCGAGATCA TCGATCGCGG CGAGCTGATG AGCGACCCGT CCTTCCTCGT CACCACCCCC TCACGCACCG AACCCGCGAT GGCCTCGGCC GGCGGCCACA CGTACTACGT GCTCTTCCCC ACACCCAACC TCACCGCCCC GCTCGACTGG TCGGTGCTGC GCTCGCGCTA CCGCGACGAG GTGGTCGCCA CCTGCGAACG CCACGGCTAC CGAGGCTTCG GCGACGCCAT CGAGGTGGAG CAGGTCACCA CGCCCGCCGA CTGGCGGGCC CGCGGGATGG CGGCGGGCGC CCCGTTCGCG GCGGCCCACA CCTTTCGCCA GACCGGTCCG TTCCGCCCCT CGAACCTGGC CCCGGGCCTC GCGAACGTCG TGTTCGCCGG CAGCGGCACC CGGCCCGGCG TCGGGGTCCC GATGGTCCTC ATTTCCGGCC GGCTGGCCGC GGAGCGGATC CTCGGCGCTG ACCGGGGTTA CCGTTCCCGC GCCCTGTGCT GA
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Protein sequence | MRTVTGATDH VVIVGAGLAG LSVALRLVGA GRRVTVLERD ATPGGRAGLL ALGDYRFDTG PTVLTMPELI ADALDCVGED LDRWLSLTRL DPMYRGFFAD GSSLDIRADP ADTAQEIRAL CGPAEAAGFE RFVGIVTAMF RTQLRHFIDA QVDSPLSLLR PQLARLAALG GFRRLDTVVG RHLRDPRTRR MFSFQAMYAG LAPHDALALY AVISYMDCVA GVYHPAGGMH AVAEALAGAA AKHGATLRYE TTVTRVEVRG GRAVAVHTAA GERIGADVVV LNPDLPIAYT ELLPPSTAPA RLRRLRYSPS CFLLLAGARV EYPHTAHHTI HFGRAWRSTF REIIDRGELM SDPSFLVTTP SRTEPAMASA GGHTYYVLFP TPNLTAPLDW SVLRSRYRDE VVATCERHGY RGFGDAIEVE QVTTPADWRA RGMAAGAPFA AAHTFRQTGP FRPSNLAPGL ANVVFAGSGT RPGVGVPMVL ISGRLAAERI LGADRGYRSR ALC
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